Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC4Q6S5L8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 AC132938.6-201ENST00000623828 1655 ntBASIC20.59■□□□□ 0.89
SHC4Q6S5L8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.59■□□□□ 0.89
SHC4Q6S5L8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 AC009065.1-201ENST00000564055 1225 ntBASIC20.59■□□□□ 0.89
SHC4Q6S5L8 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.59■□□□□ 0.89
SHC4Q6S5L8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SHC4Q6S5L8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.58■□□□□ 0.88
SHC4Q6S5L8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHC4Q6S5L8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHC4Q6S5L8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
SHC4Q6S5L8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SHC4Q6S5L8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHC4Q6S5L8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHC4Q6S5L8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SHC4Q6S5L8 KRT18P55-202ENST00000578578 1546 ntBASIC20.58■□□□□ 0.88
SHC4Q6S5L8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 HMGA1P5-201ENST00000412453 271 ntBASIC20.57■□□□□ 0.88
SHC4Q6S5L8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.57■□□□□ 0.88
SHC4Q6S5L8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHC4Q6S5L8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms