Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 AP000593.1-201ENST00000393668 712 ntBASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.02■□□□□ 0.63
RFWD3Q6PCD5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
RFWD3Q6PCD5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.02■□□□□ 0.63
RFWD3Q6PCD5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RFWD3Q6PCD5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RFWD3Q6PCD5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
RFWD3Q6PCD5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 PVRIG2P-201ENST00000435460 978 ntBASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 MYLKP1-201ENST00000509077 1580 ntBASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFWD3Q6PCD5 AC068880.1-201ENST00000507289 2297 ntBASIC19■□□□□ 0.63
RFWD3Q6PCD5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 AL162741.1-201ENST00000565563 1558 ntBASIC19■□□□□ 0.63
RFWD3Q6PCD5 AC093525.10-201ENST00000625130 1569 ntBASIC19■□□□□ 0.63
RFWD3Q6PCD5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFWD3Q6PCD5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 NOC2LP2-201ENST00000407594 1944 ntBASIC19■□□□□ 0.63
RFWD3Q6PCD5 AC112777.1-201ENST00000540175 1423 ntBASIC19■□□□□ 0.63
RFWD3Q6PCD5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFWD3Q6PCD5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 AL031598.1-201ENST00000561511 1773 ntBASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms