Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 AP002414.3-201ENST00000589352 1468 ntBASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 PMS2P2-201ENST00000425039 1128 ntBASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 LAGE3P1-201ENST00000425356 484 ntBASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 AC112482.1-201ENST00000492080 688 ntBASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 AL139424.1-201ENST00000607572 797 ntBASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 AP000867.4-201ENST00000641616 219 ntBASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 AC079781.4-201ENST00000641908 219 ntBASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CNKSR3Q6P9H4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.56■□□□□ 0.72
CNKSR3Q6P9H4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 RPS8P6-201ENST00000426177 609 ntBASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNKSR3Q6P9H4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 AC004832.2-201ENST00000426397 482 ntBASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 HMGN1P19-201ENST00000436976 333 ntBASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms