Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC27.51■■□□□ 1.99
CDC42BPAQ5VT25 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 AC073621.1-201ENST00000392730 636 ntBASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 AC004832.2-201ENST00000426397 482 ntBASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 CAND2-206ENST00000626378 333 ntTSL 5 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 PTGES2-AS1-201ENST00000443493 2100 ntBASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC27.5■■□□□ 1.99
CDC42BPAQ5VT25 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 ADM-207ENST00000530439 1839 ntTSL 2 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 SIGLEC16-201ENST00000599858 1437 ntBASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 UNC93B6-202ENST00000528242 690 ntBASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 AC040169.1-201ENST00000565382 521 ntBASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 AC073592.4-201ENST00000623827 446 ntBASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CDC42BPAQ5VT25 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 RPS2P28-201ENST00000314255 741 ntBASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC27.48■■□□□ 1.99
CDC42BPAQ5VT25 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 PMPCAP1-201ENST00000508114 1576 ntBASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 AC096633.1-201ENST00000422446 749 ntBASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDC42BPAQ5VT25 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 AC009947.1-201ENST00000444350 727 ntBASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 ALG1L5P-201ENST00000482043 771 ntBASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 AL691403.2-201ENST00000618460 490 ntBASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
CDC42BPAQ5VT25 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 AC093010.1-201ENST00000473625 1624 ntBASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 PMS2P2-201ENST00000425039 1128 ntBASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 AC105339.3-201ENST00000560043 636 ntBASIC27.45■■□□□ 1.99
CDC42BPAQ5VT25 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
CDC42BPAQ5VT25 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CDC42BPAQ5VT25 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC27.45■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms