Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00242Q5T6M2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 AC106820.2-201ENST00000563775 3264 ntBASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 KRT8P50-201ENST00000562022 1438 ntBASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 AP003097.1-201ENST00000530657 1135 ntBASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 AL109923.1-201ENST00000618799 583 ntBASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00242Q5T6M2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 AC034236.2-201ENST00000606662 1610 ntBASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 KRT18P55-202ENST00000578578 1546 ntBASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms