Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP13A4Q4VNC1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP13A4Q4VNC1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP13A4Q4VNC1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP13A4Q4VNC1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP13A4Q4VNC1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP13A4Q4VNC1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP13A4Q4VNC1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP13A4Q4VNC1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP13A4Q4VNC1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ATP13A4Q4VNC1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATP13A4Q4VNC1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATP13A4Q4VNC1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.02■□□□□ 0.63
ATP13A4Q4VNC1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 FLJ13224-201ENST00000313737 1514 ntBASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP13A4Q4VNC1 KRT18P22-201ENST00000402024 1347 ntBASIC19■□□□□ 0.63
ATP13A4Q4VNC1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms