Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.72■□□□□ 0.75
CBWD6Q4V339 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.72■□□□□ 0.75
CBWD6Q4V339 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.72■□□□□ 0.75
CBWD6Q4V339 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CBWD6Q4V339 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CBWD6Q4V339 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.72■□□□□ 0.75
CBWD6Q4V339 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.72■□□□□ 0.75
CBWD6Q4V339 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CBWD6Q4V339 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CBWD6Q4V339 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 AC005332.8-201ENST00000622750 2735 ntBASIC19.71■□□□□ 0.75
CBWD6Q4V339 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.71■□□□□ 0.75
CBWD6Q4V339 AC034232.1-201ENST00000506026 1064 ntBASIC19.71■□□□□ 0.75
CBWD6Q4V339 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CBWD6Q4V339 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CBWD6Q4V339 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 AC104076.2-201ENST00000448912 469 ntBASIC19.7■□□□□ 0.74
CBWD6Q4V339 KRT18P38-201ENST00000449496 1282 ntBASIC19.7■□□□□ 0.74
CBWD6Q4V339 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 AC132938.6-201ENST00000623828 1655 ntBASIC19.7■□□□□ 0.74
CBWD6Q4V339 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 FLJ13224-201ENST00000313737 1514 ntBASIC19.7■□□□□ 0.74
CBWD6Q4V339 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBWD6Q4V339 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.7■□□□□ 0.74
CBWD6Q4V339 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CBWD6Q4V339 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.69■□□□□ 0.74
CBWD6Q4V339 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.69■□□□□ 0.74
CBWD6Q4V339 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 STARP1-201ENST00000397973 869 ntBASIC19.69■□□□□ 0.74
CBWD6Q4V339 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.69■□□□□ 0.74
CBWD6Q4V339 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 RN7SL850P-201ENST00000579959 291 ntBASIC19.69■□□□□ 0.74
CBWD6Q4V339 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CBWD6Q4V339 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.69■□□□□ 0.74
CBWD6Q4V339 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.69■□□□□ 0.74
CBWD6Q4V339 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBWD6Q4V339 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms