Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 RNF152P1-201ENST00000397754 604 ntBASIC20.76■□□□□ 0.91
LONRF3Q496Y0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.76■□□□□ 0.91
LONRF3Q496Y0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 AC036111.1-201ENST00000533973 1582 ntBASIC20.76■□□□□ 0.91
LONRF3Q496Y0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 TSPY5P-201ENST00000426936 936 ntBASIC20.75■□□□□ 0.91
LONRF3Q496Y0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SDHAP2-201ENST00000455183 2001 ntBASIC20.75■□□□□ 0.91
LONRF3Q496Y0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LONRF3Q496Y0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.74■□□□□ 0.91
LONRF3Q496Y0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 AC092647.4-201ENST00000457211 535 ntBASIC20.74■□□□□ 0.91
LONRF3Q496Y0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 PHGDH-209ENST00000641074 1780 ntBASIC20.74■□□□□ 0.91
LONRF3Q496Y0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.74■□□□□ 0.91
LONRF3Q496Y0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 AL096828.2-201ENST00000567259 1965 ntBASIC20.73■□□□□ 0.91
LONRF3Q496Y0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms