Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 AL590627.1-203ENST00000421194 1026 ntBASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 AC009154.2-201ENST00000621177 724 ntBASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 AL031598.1-201ENST00000561511 1773 ntBASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 AC243591.1-201ENST00000452967 1364 ntBASIC21.23■□□□□ 0.99
SHROOM1Q2M3G4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 CROCCP3-202ENST00000420820 1947 ntBASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 HNRNPDP1-201ENST00000439535 754 ntBASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 FGFR3P6-201ENST00000457012 610 ntBASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHROOM1Q2M3G4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 AC125634.1-201ENST00000438758 1403 ntBASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 MIR7706-201ENST00000613747 67 ntBASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHROOM1Q2M3G4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SHROOM1Q2M3G4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SHROOM1Q2M3G4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 INTS4P1-201ENST00000438455 1935 ntBASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms