Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 AC005498.2-205ENST00000593218 784 ntBASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 AP000867.4-201ENST00000641616 219 ntBASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 AL691432.2-201ENST00000607222 2038 ntBASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.62■□□□□ 0.41
RSPO4Q2I0M5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 AC099778.1-201ENST00000568593 1911 ntBASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 AL008721.1-201ENST00000609964 604 ntBASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.61■□□□□ 0.41
RSPO4Q2I0M5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 AC005225.4-201ENST00000557330 545 ntBASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 Z92544.3-201ENST00000624747 417 ntBASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.6■□□□□ 0.41
RSPO4Q2I0M5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms