Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 KRT18P23-201ENST00000435622 1283 ntBASIC12.09□□□□□ -0.47
SYCNQ0VAF6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 AL355075.4-201ENST00000554988 638 ntBASIC12.09□□□□□ -0.47
SYCNQ0VAF6 MIR4674-201ENST00000582457 87 ntBASIC12.09□□□□□ -0.47
SYCNQ0VAF6 MIR4497-201ENST00000583208 89 ntBASIC12.09□□□□□ -0.47
SYCNQ0VAF6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 KRT8P50-201ENST00000562022 1438 ntBASIC12.09□□□□□ -0.47
SYCNQ0VAF6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYCNQ0VAF6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SYCNQ0VAF6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SYCNQ0VAF6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 EGLN1P1-201ENST00000531623 762 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 NAPSB-206ENST00000562112 1266 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 WWOX-216ENST00000569818 525 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 AC010653.2-201ENST00000623505 997 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 AC092338.2-201ENST00000568827 1415 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 HOXB1-202ENST00000577092 1414 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 GMCL1P1-201ENST00000463439 1581 ntBASIC12.08□□□□□ -0.48
SYCNQ0VAF6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SYCNQ0VAF6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 AC018470.1-201ENST00000624790 3129 ntBASIC12.07□□□□□ -0.48
SYCNQ0VAF6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms