Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 FAM8A6P-201ENST00000407496 1135 ntBASIC20.67■□□□□ 0.9
NCBP1Q09161 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.67■□□□□ 0.9
NCBP1Q09161 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.67■□□□□ 0.9
NCBP1Q09161 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.67■□□□□ 0.9
NCBP1Q09161 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.67■□□□□ 0.9
NCBP1Q09161 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.67■□□□□ 0.9
NCBP1Q09161 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.67■□□□□ 0.9
NCBP1Q09161 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCBP1Q09161 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCBP1Q09161 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCBP1Q09161 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCBP1Q09161 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCBP1Q09161 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCBP1Q09161 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCBP1Q09161 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NCBP1Q09161 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.67■□□□□ 0.9
NCBP1Q09161 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.67■□□□□ 0.9
NCBP1Q09161 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCBP1Q09161 AC141586.3-201ENST00000562166 1838 ntBASIC20.67■□□□□ 0.9
NCBP1Q09161 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 BCL2-203ENST00000589955 5011 ntBASIC20.66■□□□□ 0.9
NCBP1Q09161 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.66■□□□□ 0.9
NCBP1Q09161 AC009947.2-201ENST00000444014 672 ntBASIC20.66■□□□□ 0.9
NCBP1Q09161 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.66■□□□□ 0.9
NCBP1Q09161 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.66■□□□□ 0.9
NCBP1Q09161 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.66■□□□□ 0.9
NCBP1Q09161 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.66■□□□□ 0.9
NCBP1Q09161 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.66■□□□□ 0.9
NCBP1Q09161 AC008622.2-201ENST00000617006 1229 ntBASIC20.66■□□□□ 0.9
NCBP1Q09161 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NCBP1Q09161 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 FEM1AP3-201ENST00000403722 1741 ntBASIC20.66■□□□□ 0.9
NCBP1Q09161 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 ESPNP-201ENST00000270691 2015 ntBASIC20.66■□□□□ 0.9
NCBP1Q09161 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.66■□□□□ 0.9
NCBP1Q09161 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCBP1Q09161 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NCBP1Q09161 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NCBP1Q09161 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.65■□□□□ 0.9
NCBP1Q09161 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NCBP1Q09161 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.65■□□□□ 0.9
NCBP1Q09161 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NCBP1Q09161 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.65■□□□□ 0.9
NCBP1Q09161 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
NCBP1Q09161 MCCD1P1-208ENST00000445732 328 ntBASIC20.65■□□□□ 0.9
NCBP1Q09161 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.65■□□□□ 0.9
NCBP1Q09161 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.65■□□□□ 0.9
NCBP1Q09161 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NCBP1Q09161 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
NCBP1Q09161 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
NCBP1Q09161 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCBP1Q09161 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCBP1Q09161 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCBP1Q09161 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
NCBP1Q09161 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NCBP1Q09161 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NCBP1Q09161 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
NCBP1Q09161 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCBP1Q09161 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCBP1Q09161 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCBP1Q09161 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
NCBP1Q09161 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCBP1Q09161 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
NCBP1Q09161 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCBP1Q09161 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCBP1Q09161 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
NCBP1Q09161 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCBP1Q09161 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCBP1Q09161 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.64■□□□□ 0.89
NCBP1Q09161 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCBP1Q09161 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCBP1Q09161 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms