Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.72□□□□□ -0.05
CX3CL1P78423 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.72□□□□□ -0.05
CX3CL1P78423 AC097493.4-201ENST00000641197 219 ntBASIC14.72□□□□□ -0.05
CX3CL1P78423 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CX3CL1P78423 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 KRT8P7-201ENST00000533003 1432 ntBASIC14.72□□□□□ -0.05
CX3CL1P78423 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.72□□□□□ -0.05
CX3CL1P78423 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 MYLKP1-201ENST00000509077 1580 ntBASIC14.72□□□□□ -0.05
CX3CL1P78423 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.71□□□□□ -0.05
CX3CL1P78423 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
CX3CL1P78423 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.71□□□□□ -0.05
CX3CL1P78423 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 AC211429.1-201ENST00000415277 523 ntBASIC14.71□□□□□ -0.05
CX3CL1P78423 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 KRT18P23-201ENST00000435622 1283 ntBASIC14.71□□□□□ -0.05
CX3CL1P78423 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.71□□□□□ -0.05
CX3CL1P78423 SLC25A3P1-201ENST00000443844 931 ntBASIC14.71□□□□□ -0.05
CX3CL1P78423 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.71□□□□□ -0.05
CX3CL1P78423 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 AC012306.2-201ENST00000609350 630 ntBASIC14.71□□□□□ -0.05
CX3CL1P78423 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.71□□□□□ -0.05
CX3CL1P78423 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 HOXB1-202ENST00000577092 1414 ntBASIC14.71□□□□□ -0.05
CX3CL1P78423 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.71□□□□□ -0.05
CX3CL1P78423 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.71□□□□□ -0.05
CX3CL1P78423 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CX3CL1P78423 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CX3CL1P78423 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.71□□□□□ -0.06
CX3CL1P78423 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CX3CL1P78423 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CX3CL1P78423 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CX3CL1P78423 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CX3CL1P78423 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CX3CL1P78423 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CX3CL1P78423 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CX3CL1P78423 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CX3CL1P78423 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CX3CL1P78423 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.7□□□□□ -0.06
CX3CL1P78423 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
CX3CL1P78423 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.7□□□□□ -0.06
CX3CL1P78423 AC009947.2-201ENST00000444014 672 ntBASIC14.7□□□□□ -0.06
CX3CL1P78423 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.7□□□□□ -0.06
CX3CL1P78423 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.7□□□□□ -0.06
CX3CL1P78423 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.7□□□□□ -0.06
CX3CL1P78423 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.7□□□□□ -0.06
CX3CL1P78423 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.7□□□□□ -0.06
CX3CL1P78423 AC005363.2-201ENST00000618631 242 ntBASIC14.7□□□□□ -0.06
CX3CL1P78423 AC112497.1-201ENST00000624824 639 ntBASIC14.7□□□□□ -0.06
CX3CL1P78423 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CX3CL1P78423 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CX3CL1P78423 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms