Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.42■□□□□ 0.54
PRAMEP78395 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.42■□□□□ 0.54
PRAMEP78395 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PRAMEP78395 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEP78395 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.41■□□□□ 0.54
PRAMEP78395 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 AC009947.2-201ENST00000444014 672 ntBASIC18.41■□□□□ 0.54
PRAMEP78395 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEP78395 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.41■□□□□ 0.54
PRAMEP78395 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEP78395 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PRAMEP78395 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PRAMEP78395 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEP78395 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 AC093677.2-201ENST00000600169 1863 ntBASIC18.41■□□□□ 0.54
PRAMEP78395 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.41■□□□□ 0.54
PRAMEP78395 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEP78395 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PRAMEP78395 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 AC087499.1-201ENST00000418141 1075 ntBASIC18.4■□□□□ 0.54
PRAMEP78395 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRAMEP78395 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 AC104390.1-201ENST00000555663 520 ntBASIC18.4■□□□□ 0.54
PRAMEP78395 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.4■□□□□ 0.54
PRAMEP78395 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PRAMEP78395 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PRAMEP78395 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.4■□□□□ 0.54
PRAMEP78395 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEP78395 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PRAMEP78395 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEP78395 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEP78395 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEP78395 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEP78395 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEP78395 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEP78395 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEP78395 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEP78395 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEP78395 SDHAP2-201ENST00000455183 2001 ntBASIC18.39■□□□□ 0.53
PRAMEP78395 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEP78395 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEP78395 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.39■□□□□ 0.53
PRAMEP78395 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEP78395 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms