Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.31■□□□□ 0.36
GABREP78334 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.31■□□□□ 0.36
GABREP78334 AC005336.2-201ENST00000593183 939 ntBASIC17.31■□□□□ 0.36
GABREP78334 AC008687.5-201ENST00000593746 558 ntBASIC17.31■□□□□ 0.36
GABREP78334 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABREP78334 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABREP78334 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABREP78334 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.31■□□□□ 0.36
GABREP78334 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABREP78334 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GABREP78334 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABREP78334 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABREP78334 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABREP78334 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABREP78334 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GABREP78334 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.3■□□□□ 0.36
GABREP78334 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GABREP78334 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GABREP78334 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.3■□□□□ 0.36
GABREP78334 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.3■□□□□ 0.36
GABREP78334 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.3■□□□□ 0.36
GABREP78334 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.3■□□□□ 0.36
GABREP78334 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
GABREP78334 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.3■□□□□ 0.36
GABREP78334 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.3■□□□□ 0.36
GABREP78334 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.3■□□□□ 0.36
GABREP78334 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.3■□□□□ 0.36
GABREP78334 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.3■□□□□ 0.36
GABREP78334 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.3■□□□□ 0.36
GABREP78334 AP001269.4-201ENST00000609611 512 ntBASIC17.3■□□□□ 0.36
GABREP78334 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
GABREP78334 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.3■□□□□ 0.36
GABREP78334 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
GABREP78334 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABREP78334 AC104109.2-201ENST00000602919 1418 ntBASIC17.3■□□□□ 0.36
GABREP78334 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.29■□□□□ 0.36
GABREP78334 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GABREP78334 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
GABREP78334 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GABREP78334 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.29■□□□□ 0.36
GABREP78334 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GABREP78334 AC141586.3-201ENST00000562166 1838 ntBASIC17.29■□□□□ 0.36
GABREP78334 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.29■□□□□ 0.36
GABREP78334 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.29■□□□□ 0.36
GABREP78334 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.29■□□□□ 0.36
GABREP78334 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.29■□□□□ 0.36
GABREP78334 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
GABREP78334 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 AC093484.2-201ENST00000580996 2166 ntBASIC17.29■□□□□ 0.36
GABREP78334 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.29■□□□□ 0.36
GABREP78334 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
GABREP78334 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.29■□□□□ 0.36
GABREP78334 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABREP78334 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GABREP78334 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GABREP78334 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABREP78334 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GABREP78334 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GABREP78334 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GABREP78334 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABREP78334 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABREP78334 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABREP78334 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.28■□□□□ 0.36
GABREP78334 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GABREP78334 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.28■□□□□ 0.36
GABREP78334 MED15P5-201ENST00000423150 992 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms