Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.81■□□□□ 0.44
YBX1P67809 AL359075.1-203ENST00000462729 1002 ntBASIC17.81■□□□□ 0.44
YBX1P67809 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.81■□□□□ 0.44
YBX1P67809 AC063952.2-201ENST00000498792 1227 ntBASIC17.81■□□□□ 0.44
YBX1P67809 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.81■□□□□ 0.44
YBX1P67809 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.81■□□□□ 0.44
YBX1P67809 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.81■□□□□ 0.44
YBX1P67809 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.81■□□□□ 0.44
YBX1P67809 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
YBX1P67809 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
YBX1P67809 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
YBX1P67809 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.8■□□□□ 0.44
YBX1P67809 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.8■□□□□ 0.44
YBX1P67809 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
YBX1P67809 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.8■□□□□ 0.44
YBX1P67809 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.8■□□□□ 0.44
YBX1P67809 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.8■□□□□ 0.44
YBX1P67809 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.8■□□□□ 0.44
YBX1P67809 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
YBX1P67809 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 AC010240.3-201ENST00000607688 395 ntBASIC17.8■□□□□ 0.44
YBX1P67809 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.8■□□□□ 0.44
YBX1P67809 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.8■□□□□ 0.44
YBX1P67809 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
YBX1P67809 AC112777.1-201ENST00000540175 1423 ntBASIC17.8■□□□□ 0.44
YBX1P67809 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.8■□□□□ 0.44
YBX1P67809 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YBX1P67809 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
YBX1P67809 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 AL163051.1-201ENST00000569214 1512 ntBASIC17.79■□□□□ 0.44
YBX1P67809 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 AL049597.2-201ENST00000565575 961 ntBASIC17.79■□□□□ 0.44
YBX1P67809 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 AC079602.3-201ENST00000623931 403 ntBASIC17.79■□□□□ 0.44
YBX1P67809 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms