Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.03□□□□□ -0.16
SNRPEP62304 MACF1-219ENST00000484793 834 ntTSL 2 BASIC14.03□□□□□ -0.16
SNRPEP62304 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.03□□□□□ -0.16
SNRPEP62304 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNRPEP62304 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNRPEP62304 KRT16P6-202ENST00000425692 1426 ntBASIC14.03□□□□□ -0.16
SNRPEP62304 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.03□□□□□ -0.16
SNRPEP62304 AC061975.6-201ENST00000579045 1553 ntBASIC14.03□□□□□ -0.16
SNRPEP62304 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNRPEP62304 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.03□□□□□ -0.16
SNRPEP62304 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.03□□□□□ -0.16
SNRPEP62304 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNRPEP62304 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNRPEP62304 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNRPEP62304 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
SNRPEP62304 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNRPEP62304 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNRPEP62304 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
SNRPEP62304 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNRPEP62304 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SNRPEP62304 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SNRPEP62304 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNRPEP62304 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNRPEP62304 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.02□□□□□ -0.16
SNRPEP62304 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNRPEP62304 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.02□□□□□ -0.16
SNRPEP62304 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNRPEP62304 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.02□□□□□ -0.16
SNRPEP62304 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 HYI-210ENST00000486909 905 ntTSL 5 BASIC14.02□□□□□ -0.17
SNRPEP62304 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.02□□□□□ -0.17
SNRPEP62304 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 CICP14-201ENST00000629111 2732 ntBASIC14.02□□□□□ -0.17
SNRPEP62304 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.02□□□□□ -0.17
SNRPEP62304 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
SNRPEP62304 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNRPEP62304 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.02□□□□□ -0.17
SNRPEP62304 AC008556.1-201ENST00000610908 2040 ntBASIC14.02□□□□□ -0.17
SNRPEP62304 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SNRPEP62304 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SNRPEP62304 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.02□□□□□ -0.17
SNRPEP62304 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.01□□□□□ -0.17
SNRPEP62304 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SNRPEP62304 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.01□□□□□ -0.17
SNRPEP62304 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.01□□□□□ -0.17
SNRPEP62304 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.01□□□□□ -0.17
SNRPEP62304 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SNRPEP62304 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.01□□□□□ -0.17
SNRPEP62304 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.01□□□□□ -0.17
SNRPEP62304 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SNRPEP62304 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNRPEP62304 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SNRPEP62304 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SNRPEP62304 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.01□□□□□ -0.17
SNRPEP62304 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.01□□□□□ -0.17
SNRPEP62304 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SNRPEP62304 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14□□□□□ -0.17
SNRPEP62304 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SNRPEP62304 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SNRPEP62304 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNRPEP62304 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14□□□□□ -0.17
SNRPEP62304 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SNRPEP62304 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNRPEP62304 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SNRPEP62304 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SNRPEP62304 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14□□□□□ -0.17
SNRPEP62304 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms