Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.02■□□□□ 0.47
LIMK1P53667 AL138781.2-201ENST00000617896 1843 ntBASIC18.02■□□□□ 0.47
LIMK1P53667 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.02■□□□□ 0.47
LIMK1P53667 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LIMK1P53667 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
LIMK1P53667 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 AL691432.2-201ENST00000607222 2038 ntBASIC18.01■□□□□ 0.47
LIMK1P53667 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
LIMK1P53667 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.01■□□□□ 0.47
LIMK1P53667 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.01■□□□□ 0.47
LIMK1P53667 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LIMK1P53667 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.01■□□□□ 0.47
LIMK1P53667 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LIMK1P53667 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
LIMK1P53667 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.01■□□□□ 0.47
LIMK1P53667 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LIMK1P53667 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.01■□□□□ 0.47
LIMK1P53667 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.01■□□□□ 0.47
LIMK1P53667 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.01■□□□□ 0.47
LIMK1P53667 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LIMK1P53667 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.01■□□□□ 0.47
LIMK1P53667 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LIMK1P53667 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LIMK1P53667 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
LIMK1P53667 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18■□□□□ 0.47
LIMK1P53667 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LIMK1P53667 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18■□□□□ 0.47
LIMK1P53667 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18■□□□□ 0.47
LIMK1P53667 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18■□□□□ 0.47
LIMK1P53667 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18■□□□□ 0.47
LIMK1P53667 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18■□□□□ 0.47
LIMK1P53667 KRT18P3-201ENST00000451602 1288 ntBASIC18■□□□□ 0.47
LIMK1P53667 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18■□□□□ 0.47
LIMK1P53667 AC034105.1-201ENST00000563488 319 ntBASIC18■□□□□ 0.47
LIMK1P53667 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18■□□□□ 0.47
LIMK1P53667 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
LIMK1P53667 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LIMK1P53667 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18■□□□□ 0.47
LIMK1P53667 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LIMK1P53667 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LIMK1P53667 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
LIMK1P53667 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18■□□□□ 0.47
LIMK1P53667 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.99■□□□□ 0.47
LIMK1P53667 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.99■□□□□ 0.47
LIMK1P53667 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.99■□□□□ 0.47
LIMK1P53667 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LIMK1P53667 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.99■□□□□ 0.47
LIMK1P53667 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.99■□□□□ 0.47
LIMK1P53667 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.99■□□□□ 0.47
LIMK1P53667 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.99■□□□□ 0.47
LIMK1P53667 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.99■□□□□ 0.47
LIMK1P53667 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
LIMK1P53667 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.99■□□□□ 0.47
LIMK1P53667 MTDHP3-201ENST00000594186 672 ntBASIC17.99■□□□□ 0.47
LIMK1P53667 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 AC134684.3-201ENST00000641758 218 ntBASIC17.99■□□□□ 0.47
LIMK1P53667 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LIMK1P53667 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.99■□□□□ 0.47
LIMK1P53667 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LIMK1P53667 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.99■□□□□ 0.47
LIMK1P53667 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LIMK1P53667 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms