Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ACLYP53396 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ACLYP53396 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.06■□□□□ 0.8
ACLYP53396 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ACLYP53396 AP002414.3-201ENST00000589352 1468 ntBASIC20.06■□□□□ 0.8
ACLYP53396 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.06■□□□□ 0.8
ACLYP53396 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.06■□□□□ 0.8
ACLYP53396 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.06■□□□□ 0.8
ACLYP53396 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.06■□□□□ 0.8
ACLYP53396 RPS8P6-201ENST00000426177 609 ntBASIC20.06■□□□□ 0.8
ACLYP53396 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.06■□□□□ 0.8
ACLYP53396 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 DNAJB3-201ENST00000446806 729 ntBASIC20.06■□□□□ 0.8
ACLYP53396 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.06■□□□□ 0.8
ACLYP53396 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
ACLYP53396 AC093484.2-201ENST00000580996 2166 ntBASIC20.06■□□□□ 0.8
ACLYP53396 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.06■□□□□ 0.8
ACLYP53396 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
ACLYP53396 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACLYP53396 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.06■□□□□ 0.8
ACLYP53396 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.06■□□□□ 0.8
ACLYP53396 LINC01126-201ENST00000623515 1646 ntBASIC20.05■□□□□ 0.8
ACLYP53396 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.05■□□□□ 0.8
ACLYP53396 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACLYP53396 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ACLYP53396 AC007952.6-201ENST00000573168 2673 ntBASIC20.05■□□□□ 0.8
ACLYP53396 AC003957.1-201ENST00000625108 2673 ntBASIC20.05■□□□□ 0.8
ACLYP53396 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACLYP53396 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACLYP53396 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.05■□□□□ 0.8
ACLYP53396 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACLYP53396 AL355385.1-201ENST00000606123 409 ntBASIC20.05■□□□□ 0.8
ACLYP53396 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.05■□□□□ 0.8
ACLYP53396 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACLYP53396 AL161938.1-201ENST00000569833 2180 ntBASIC20.05■□□□□ 0.8
ACLYP53396 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
ACLYP53396 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ACLYP53396 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ACLYP53396 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ACLYP53396 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.05■□□□□ 0.8
ACLYP53396 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACLYP53396 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACLYP53396 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACLYP53396 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
ACLYP53396 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.04■□□□□ 0.8
ACLYP53396 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.04■□□□□ 0.8
ACLYP53396 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.04■□□□□ 0.8
ACLYP53396 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ACLYP53396 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.04■□□□□ 0.8
ACLYP53396 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.04■□□□□ 0.8
ACLYP53396 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ACLYP53396 RNA5SP416-201ENST00000516838 111 ntBASIC20.04■□□□□ 0.8
ACLYP53396 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.04■□□□□ 0.8
ACLYP53396 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.04■□□□□ 0.8
ACLYP53396 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ACLYP53396 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACLYP53396 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ACLYP53396 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
ACLYP53396 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.04■□□□□ 0.8
ACLYP53396 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.04■□□□□ 0.8
ACLYP53396 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.04■□□□□ 0.8
ACLYP53396 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ACLYP53396 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ACLYP53396 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ACLYP53396 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ACLYP53396 AIRN-201ENST00000601203 4374 ntBASIC20.03■□□□□ 0.8
ACLYP53396 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
ACLYP53396 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ACLYP53396 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ACLYP53396 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ACLYP53396 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.03■□□□□ 0.8
ACLYP53396 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ACLYP53396 AC007967.2-201ENST00000432613 625 ntBASIC20.03■□□□□ 0.8
ACLYP53396 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ACLYP53396 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.03■□□□□ 0.8
ACLYP53396 AC004967.1-201ENST00000453589 447 ntBASIC20.03■□□□□ 0.8
ACLYP53396 AC112698.1-201ENST00000510299 916 ntBASIC20.03■□□□□ 0.8
ACLYP53396 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ACLYP53396 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ACLYP53396 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.03■□□□□ 0.8
ACLYP53396 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.03■□□□□ 0.8
ACLYP53396 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms