Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1DP48730 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.26■□□□□ 0.51
CSNK1DP48730 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1DP48730 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.26■□□□□ 0.51
CSNK1DP48730 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CSNK1DP48730 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1DP48730 AL592071.1-201ENST00000611956 408 ntBASIC18.26■□□□□ 0.51
CSNK1DP48730 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1DP48730 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1DP48730 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1DP48730 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1DP48730 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CSNK1DP48730 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1DP48730 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1DP48730 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1DP48730 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 KRT18P1-202ENST00000452408 1331 ntBASIC18.25■□□□□ 0.51
CSNK1DP48730 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 RNF165-205ENST00000588679 2904 ntBASIC18.25■□□□□ 0.51
CSNK1DP48730 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 BICD1-207ENST00000551848 1962 ntBASIC18.25■□□□□ 0.51
CSNK1DP48730 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1DP48730 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.25■□□□□ 0.51
CSNK1DP48730 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 AP002414.4-201ENST00000589764 1148 ntBASIC18.25■□□□□ 0.51
CSNK1DP48730 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.25■□□□□ 0.51
CSNK1DP48730 AC093458.2-201ENST00000623150 629 ntBASIC18.25■□□□□ 0.51
CSNK1DP48730 AC124864.1-201ENST00000623408 392 ntBASIC18.25■□□□□ 0.51
CSNK1DP48730 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1DP48730 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
CSNK1DP48730 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CSNK1DP48730 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1DP48730 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.24■□□□□ 0.51
CSNK1DP48730 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.24■□□□□ 0.51
CSNK1DP48730 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.24■□□□□ 0.51
CSNK1DP48730 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.24■□□□□ 0.51
CSNK1DP48730 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 AC246785.2-201ENST00000432512 513 ntBASIC18.24■□□□□ 0.51
CSNK1DP48730 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
CSNK1DP48730 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.24■□□□□ 0.51
CSNK1DP48730 TPSP2-201ENST00000561760 610 ntBASIC18.24■□□□□ 0.51
CSNK1DP48730 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CSNK1DP48730 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CSNK1DP48730 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.24■□□□□ 0.51
CSNK1DP48730 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.24■□□□□ 0.51
CSNK1DP48730 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.24■□□□□ 0.51
CSNK1DP48730 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.24■□□□□ 0.51
CSNK1DP48730 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CSNK1DP48730 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CSNK1DP48730 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1DP48730 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.23■□□□□ 0.51
CSNK1DP48730 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.23■□□□□ 0.51
CSNK1DP48730 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.23■□□□□ 0.51
CSNK1DP48730 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CSNK1DP48730 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.23■□□□□ 0.51
CSNK1DP48730 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1DP48730 MTCL1P1-201ENST00000446207 792 ntBASIC18.23■□□□□ 0.51
CSNK1DP48730 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms