Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SLC1A6P48664 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC1A6P48664 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC1A6P48664 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC1A6P48664 AL023284.2-201ENST00000405850 579 ntBASIC17.97■□□□□ 0.47
SLC1A6P48664 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC1A6P48664 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC1A6P48664 AC026271.3-201ENST00000571884 352 ntBASIC17.97■□□□□ 0.47
SLC1A6P48664 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC1A6P48664 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC1A6P48664 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC1A6P48664 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC1A6P48664 PKD1P1-201ENST00000458669 6805 ntBASIC17.97■□□□□ 0.47
SLC1A6P48664 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SLC1A6P48664 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC1A6P48664 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A6P48664 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A6P48664 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A6P48664 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLC1A6P48664 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A6P48664 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A6P48664 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A6P48664 MCCD1P1-208ENST00000445732 328 ntBASIC17.96■□□□□ 0.47
SLC1A6P48664 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A6P48664 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A6P48664 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A6P48664 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A6P48664 CR392000.1-201ENST00000624770 1228 ntBASIC17.96■□□□□ 0.47
SLC1A6P48664 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A6P48664 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A6P48664 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A6P48664 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A6P48664 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A6P48664 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A6P48664 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A6P48664 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC1A6P48664 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A6P48664 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLC1A6P48664 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC1A6P48664 SDHAP2-201ENST00000455183 2001 ntBASIC17.96■□□□□ 0.47
SLC1A6P48664 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC1A6P48664 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC1A6P48664 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC1A6P48664 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
SLC1A6P48664 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A6P48664 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A6P48664 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC1A6P48664 KRT18P55-202ENST00000578578 1546 ntBASIC17.95■□□□□ 0.46
SLC1A6P48664 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC1A6P48664 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC1A6P48664 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.95■□□□□ 0.46
SLC1A6P48664 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SLC1A6P48664 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.95■□□□□ 0.46
SLC1A6P48664 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC1A6P48664 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 GPAT2P1-201ENST00000444924 1672 ntBASIC17.95■□□□□ 0.46
SLC1A6P48664 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC1A6P48664 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC1A6P48664 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC1A6P48664 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC1A6P48664 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC1A6P48664 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 AC106820.2-201ENST00000563775 3264 ntBASIC17.94■□□□□ 0.46
SLC1A6P48664 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms