Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SLC6A9P48067 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A9P48067 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A9P48067 MIR564-202ENST00000385049 94 ntBASIC16.17■□□□□ 0.18
SLC6A9P48067 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 CCR12P-201ENST00000446203 998 ntBASIC16.17■□□□□ 0.18
SLC6A9P48067 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A9P48067 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A9P48067 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 C2orf69P3-201ENST00000565542 1120 ntBASIC16.17■□□□□ 0.18
SLC6A9P48067 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A9P48067 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A9P48067 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A9P48067 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A9P48067 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC6A9P48067 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A9P48067 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC6A9P48067 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC6A9P48067 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC6A9P48067 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 MMP23A-201ENST00000234610 1017 ntBASIC16.16■□□□□ 0.18
SLC6A9P48067 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A9P48067 AC087499.1-201ENST00000418141 1075 ntBASIC16.16■□□□□ 0.18
SLC6A9P48067 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A9P48067 ECEL1P3-201ENST00000427961 737 ntBASIC16.16■□□□□ 0.18
SLC6A9P48067 SLC25A1P2-201ENST00000430693 912 ntBASIC16.16■□□□□ 0.18
SLC6A9P48067 TSPY17P-201ENST00000450329 467 ntBASIC16.16■□□□□ 0.18
SLC6A9P48067 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A9P48067 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC6A9P48067 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 LINC01023-201ENST00000606054 436 ntBASIC16.16■□□□□ 0.18
SLC6A9P48067 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A9P48067 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC6A9P48067 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A9P48067 AL354751.1-201ENST00000412768 1863 ntBASIC16.16■□□□□ 0.18
SLC6A9P48067 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A9P48067 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC6A9P48067 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A9P48067 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC6A9P48067 NOC2LP2-201ENST00000407594 1944 ntBASIC16.15■□□□□ 0.18
SLC6A9P48067 ABALON-201ENST00000629058 1903 ntBASIC16.15■□□□□ 0.18
SLC6A9P48067 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A9P48067 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A9P48067 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A9P48067 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A9P48067 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A9P48067 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 AP000593.1-201ENST00000393668 712 ntBASIC16.15■□□□□ 0.18
SLC6A9P48067 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A9P48067 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A9P48067 AP003041.3-201ENST00000527151 707 ntBASIC16.15■□□□□ 0.18
SLC6A9P48067 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A9P48067 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A9P48067 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A9P48067 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A9P48067 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A9P48067 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A9P48067 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms