Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.61■□□□□ 0.41
SLC6A12P48065 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC6A12P48065 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A12P48065 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC6A12P48065 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC6A12P48065 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A12P48065 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A12P48065 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC6A12P48065 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC6A12P48065 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC6A12P48065 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC6A12P48065 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A12P48065 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SLC6A12P48065 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SLC6A12P48065 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SLC6A12P48065 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC6A12P48065 STARP1-201ENST00000397973 869 ntBASIC17.6■□□□□ 0.41
SLC6A12P48065 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A12P48065 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.6■□□□□ 0.41
SLC6A12P48065 KRT18P57-201ENST00000443599 1254 ntBASIC17.6■□□□□ 0.41
SLC6A12P48065 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 DUTP2-201ENST00000519164 463 ntBASIC17.6■□□□□ 0.41
SLC6A12P48065 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.6■□□□□ 0.41
SLC6A12P48065 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 LINC00167-201ENST00000530583 1419 ntBASIC17.6■□□□□ 0.41
SLC6A12P48065 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC6A12P48065 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC6A12P48065 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SLC6A12P48065 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A12P48065 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SLC6A12P48065 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC6A12P48065 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A12P48065 AC020763.4-201ENST00000623414 4170 ntBASIC17.59■□□□□ 0.41
SLC6A12P48065 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC6A12P48065 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SLC6A12P48065 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SLC6A12P48065 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC6A12P48065 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC6A12P48065 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.59■□□□□ 0.41
SLC6A12P48065 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC6A12P48065 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SLC6A12P48065 AC006011.2-201ENST00000621313 1158 ntBASIC17.59■□□□□ 0.41
SLC6A12P48065 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 AL391807.1-203ENST00000604392 2365 ntBASIC17.59■□□□□ 0.41
SLC6A12P48065 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC6A12P48065 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SLC6A12P48065 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A12P48065 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.58■□□□□ 0.41
SLC6A12P48065 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A12P48065 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A12P48065 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SLC6A12P48065 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SLC6A12P48065 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A12P48065 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A12P48065 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A12P48065 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A12P48065 AC067852.2-201ENST00000590513 2313 ntBASIC17.58■□□□□ 0.41
SLC6A12P48065 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SLC6A12P48065 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
SLC6A12P48065 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A12P48065 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms