Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA4P43681 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.43■□□□□ 0.54
CHRNA4P43681 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA4P43681 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRNA4P43681 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRNA4P43681 AC104076.2-201ENST00000448912 469 ntBASIC18.43■□□□□ 0.54
CHRNA4P43681 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA4P43681 RASA4DP-201ENST00000460726 1199 ntBASIC18.43■□□□□ 0.54
CHRNA4P43681 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRNA4P43681 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRNA4P43681 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.43■□□□□ 0.54
CHRNA4P43681 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRNA4P43681 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA4P43681 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
CHRNA4P43681 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRNA4P43681 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA4P43681 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA4P43681 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA4P43681 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA4P43681 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRNA4P43681 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRNA4P43681 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.42■□□□□ 0.54
CHRNA4P43681 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CHRNA4P43681 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA4P43681 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA4P43681 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA4P43681 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRNA4P43681 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA4P43681 KRT18P38-201ENST00000449496 1282 ntBASIC18.42■□□□□ 0.54
CHRNA4P43681 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRNA4P43681 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRNA4P43681 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA4P43681 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA4P43681 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 AL031432.5-201ENST00000641059 760 ntBASIC18.42■□□□□ 0.54
CHRNA4P43681 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRNA4P43681 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA4P43681 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA4P43681 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA4P43681 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.41■□□□□ 0.54
CHRNA4P43681 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CHRNA4P43681 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA4P43681 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHRNA4P43681 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.41■□□□□ 0.54
CHRNA4P43681 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 AK4P3-201ENST00000418260 669 ntBASIC18.41■□□□□ 0.54
CHRNA4P43681 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.41■□□□□ 0.54
CHRNA4P43681 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.41■□□□□ 0.54
CHRNA4P43681 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CHRNA4P43681 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA4P43681 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.41■□□□□ 0.54
CHRNA4P43681 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.41■□□□□ 0.54
CHRNA4P43681 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA4P43681 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA4P43681 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA4P43681 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.41■□□□□ 0.54
CHRNA4P43681 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA4P43681 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA4P43681 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA4P43681 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA4P43681 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CHRNA4P43681 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA4P43681 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA4P43681 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA4P43681 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA4P43681 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA4P43681 PVRIG2P-201ENST00000435460 978 ntBASIC18.4■□□□□ 0.54
CHRNA4P43681 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA4P43681 AC034232.1-201ENST00000506026 1064 ntBASIC18.4■□□□□ 0.54
CHRNA4P43681 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA4P43681 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.4■□□□□ 0.54
CHRNA4P43681 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CHRNA4P43681 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA4P43681 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.4■□□□□ 0.54
CHRNA4P43681 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA4P43681 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA4P43681 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA4P43681 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA4P43681 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA4P43681 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.39■□□□□ 0.54
CHRNA4P43681 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA4P43681 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms