Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSP1P33241 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
LSP1P33241 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.33■□□□□ 0.52
LSP1P33241 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSP1P33241 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSP1P33241 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSP1P33241 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LSP1P33241 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSP1P33241 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
LSP1P33241 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.32■□□□□ 0.52
LSP1P33241 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LSP1P33241 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LSP1P33241 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.32■□□□□ 0.52
LSP1P33241 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
LSP1P33241 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.32■□□□□ 0.52
LSP1P33241 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.32■□□□□ 0.52
LSP1P33241 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 AC137761.2-201ENST00000561729 223 ntBASIC18.32■□□□□ 0.52
LSP1P33241 AC145350.3-201ENST00000569033 163 ntBASIC18.32■□□□□ 0.52
LSP1P33241 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.32■□□□□ 0.52
LSP1P33241 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LSP1P33241 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.32■□□□□ 0.52
LSP1P33241 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSP1P33241 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.31■□□□□ 0.52
LSP1P33241 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LSP1P33241 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LSP1P33241 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
LSP1P33241 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.31■□□□□ 0.52
LSP1P33241 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
LSP1P33241 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LSP1P33241 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 KRT18P11-201ENST00000435214 1283 ntBASIC18.31■□□□□ 0.52
LSP1P33241 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 DUX4L16-201ENST00000555130 1264 ntBASIC18.31■□□□□ 0.52
LSP1P33241 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.31■□□□□ 0.52
LSP1P33241 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.31■□□□□ 0.52
LSP1P33241 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.31■□□□□ 0.52
LSP1P33241 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.31■□□□□ 0.52
LSP1P33241 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LSP1P33241 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSP1P33241 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.31■□□□□ 0.52
LSP1P33241 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.31■□□□□ 0.52
LSP1P33241 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.31■□□□□ 0.52
LSP1P33241 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LSP1P33241 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 PCDHA1-201ENST00000378133 2726 ntBASIC18.3■□□□□ 0.52
LSP1P33241 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.3■□□□□ 0.52
LSP1P33241 AC008741.2-201ENST00000612792 3115 ntBASIC18.3■□□□□ 0.52
LSP1P33241 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.3■□□□□ 0.52
LSP1P33241 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.3■□□□□ 0.52
LSP1P33241 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.3■□□□□ 0.52
LSP1P33241 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.3■□□□□ 0.52
LSP1P33241 RAP2CP1-201ENST00000605103 478 ntBASIC18.3■□□□□ 0.52
LSP1P33241 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.3■□□□□ 0.52
LSP1P33241 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms