Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LCN1P31025 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.9■□□□□ 0.3
LCN1P31025 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.9■□□□□ 0.3
LCN1P31025 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LCN1P31025 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LCN1P31025 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.9■□□□□ 0.3
LCN1P31025 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.9■□□□□ 0.3
LCN1P31025 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.9■□□□□ 0.3
LCN1P31025 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.9■□□□□ 0.3
LCN1P31025 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.9■□□□□ 0.3
LCN1P31025 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.9■□□□□ 0.3
LCN1P31025 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LCN1P31025 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LCN1P31025 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LCN1P31025 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCN1P31025 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LCN1P31025 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LCN1P31025 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LCN1P31025 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LCN1P31025 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
LCN1P31025 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.89■□□□□ 0.29
LCN1P31025 AL390961.4-201ENST00000623958 2535 ntBASIC16.89■□□□□ 0.29
LCN1P31025 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.89■□□□□ 0.29
LCN1P31025 AC005521.1-201ENST00000393351 872 ntBASIC16.89■□□□□ 0.29
LCN1P31025 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.89■□□□□ 0.29
LCN1P31025 PVRIG2P-201ENST00000435460 978 ntBASIC16.89■□□□□ 0.29
LCN1P31025 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.89■□□□□ 0.29
LCN1P31025 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.89■□□□□ 0.29
LCN1P31025 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
LCN1P31025 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LCN1P31025 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LCN1P31025 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.89■□□□□ 0.29
LCN1P31025 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LCN1P31025 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.89■□□□□ 0.29
LCN1P31025 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.89■□□□□ 0.29
LCN1P31025 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LCN1P31025 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCN1P31025 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LCN1P31025 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LCN1P31025 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
LCN1P31025 AP000997.3-201ENST00000623333 2250 ntBASIC16.88■□□□□ 0.29
LCN1P31025 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LCN1P31025 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.88■□□□□ 0.29
LCN1P31025 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
LCN1P31025 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.88■□□□□ 0.29
LCN1P31025 GCSHP2-201ENST00000560971 527 ntBASIC16.88■□□□□ 0.29
LCN1P31025 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.88■□□□□ 0.29
LCN1P31025 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LCN1P31025 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.88■□□□□ 0.29
LCN1P31025 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.88■□□□□ 0.29
LCN1P31025 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.88■□□□□ 0.29
LCN1P31025 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LCN1P31025 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.88■□□□□ 0.29
LCN1P31025 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
LCN1P31025 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LCN1P31025 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms