Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.41■□□□□ 0.06
COL8A2P25067 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL8A2P25067 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL8A2P25067 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL8A2P25067 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL8A2P25067 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COL8A2P25067 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
COL8A2P25067 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
COL8A2P25067 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL8A2P25067 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.41■□□□□ 0.06
COL8A2P25067 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
COL8A2P25067 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL8A2P25067 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
COL8A2P25067 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.4■□□□□ 0.06
COL8A2P25067 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.4■□□□□ 0.06
COL8A2P25067 AL353692.3-201ENST00000407031 1396 ntBASIC15.4■□□□□ 0.06
COL8A2P25067 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.4■□□□□ 0.06
COL8A2P25067 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.4■□□□□ 0.06
COL8A2P25067 LINC00265-3P-201ENST00000447588 903 ntBASIC15.4■□□□□ 0.06
COL8A2P25067 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.4■□□□□ 0.06
COL8A2P25067 AP000867.3-201ENST00000524675 377 ntBASIC15.4■□□□□ 0.06
COL8A2P25067 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.4■□□□□ 0.06
COL8A2P25067 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.4■□□□□ 0.06
COL8A2P25067 TPSP2-201ENST00000561760 610 ntBASIC15.4■□□□□ 0.06
COL8A2P25067 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.4■□□□□ 0.06
COL8A2P25067 AL121894.2-201ENST00000602977 491 ntBASIC15.4■□□□□ 0.06
COL8A2P25067 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
COL8A2P25067 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
COL8A2P25067 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
COL8A2P25067 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.4■□□□□ 0.06
COL8A2P25067 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
COL8A2P25067 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 ANO7L1-203ENST00000602586 1720 ntBASIC15.4■□□□□ 0.06
COL8A2P25067 AC005082.1-201ENST00000413042 2259 ntBASIC15.4■□□□□ 0.06
COL8A2P25067 KRT89P-201ENST00000620027 1478 ntBASIC15.4■□□□□ 0.06
COL8A2P25067 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL8A2P25067 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
COL8A2P25067 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.39■□□□□ 0.05
COL8A2P25067 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
COL8A2P25067 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COL8A2P25067 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.39■□□□□ 0.05
COL8A2P25067 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.39■□□□□ 0.05
COL8A2P25067 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 DRAXINP1-201ENST00000437611 948 ntBASIC15.39■□□□□ 0.05
COL8A2P25067 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.39■□□□□ 0.05
COL8A2P25067 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.39■□□□□ 0.05
COL8A2P25067 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.39■□□□□ 0.05
COL8A2P25067 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.39■□□□□ 0.05
COL8A2P25067 PRELID1P1-202ENST00000567272 903 ntBASIC15.39■□□□□ 0.05
COL8A2P25067 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.39■□□□□ 0.05
COL8A2P25067 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.39■□□□□ 0.05
COL8A2P25067 AC004263.2-201ENST00000617183 678 ntBASIC15.39■□□□□ 0.05
COL8A2P25067 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.39■□□□□ 0.05
COL8A2P25067 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.39■□□□□ 0.05
COL8A2P25067 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.39■□□□□ 0.05
COL8A2P25067 AC018470.1-201ENST00000624790 3129 ntBASIC15.39■□□□□ 0.05
COL8A2P25067 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
COL8A2P25067 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.39■□□□□ 0.05
COL8A2P25067 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL8A2P25067 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.39■□□□□ 0.05
COL8A2P25067 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
COL8A2P25067 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL8A2P25067 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL8A2P25067 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL8A2P25067 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.38■□□□□ 0.05
COL8A2P25067 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL8A2P25067 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
COL8A2P25067 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
COL8A2P25067 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
COL8A2P25067 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms