Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAB4AP20338 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAB4AP20338 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB4AP20338 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB4AP20338 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAB4AP20338 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB4AP20338 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAB4AP20338 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
RAB4AP20338 AC134043.2-201ENST00000624206 2238 ntBASIC14.01□□□□□ -0.17
RAB4AP20338 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB4AP20338 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB4AP20338 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB4AP20338 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB4AP20338 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAB4AP20338 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB4AP20338 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB4AP20338 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB4AP20338 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB4AP20338 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB4AP20338 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
RAB4AP20338 AC099063.4-201ENST00000641099 1602 ntBASIC14.01□□□□□ -0.17
RAB4AP20338 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14□□□□□ -0.17
RAB4AP20338 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14□□□□□ -0.17
RAB4AP20338 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RAB4AP20338 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAB4AP20338 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
RAB4AP20338 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RAB4AP20338 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RAB4AP20338 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14□□□□□ -0.17
RAB4AP20338 MFSD11-216ENST00000590393 1141 ntBASIC14□□□□□ -0.17
RAB4AP20338 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14□□□□□ -0.17
RAB4AP20338 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
RAB4AP20338 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 AC108860.2-201ENST00000562760 2183 ntBASIC14□□□□□ -0.17
RAB4AP20338 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14□□□□□ -0.17
RAB4AP20338 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14□□□□□ -0.17
RAB4AP20338 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14□□□□□ -0.17
RAB4AP20338 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
RAB4AP20338 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB4AP20338 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RAB4AP20338 AC018553.1-201ENST00000616682 1458 ntBASIC13.99□□□□□ -0.17
RAB4AP20338 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
RAB4AP20338 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RAB4AP20338 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 MCRIP2P1-201ENST00000394346 511 ntBASIC13.99□□□□□ -0.17
RAB4AP20338 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAB4AP20338 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms