Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NFKB1P19838 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NFKB1P19838 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NFKB1P19838 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NFKB1P19838 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NFKB1P19838 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.58■□□□□ 0.56
NFKB1P19838 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.58■□□□□ 0.56
NFKB1P19838 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.58■□□□□ 0.56
NFKB1P19838 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NFKB1P19838 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NFKB1P19838 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NFKB1P19838 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NFKB1P19838 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
NFKB1P19838 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
NFKB1P19838 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
NFKB1P19838 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NFKB1P19838 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.58■□□□□ 0.56
NFKB1P19838 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.58■□□□□ 0.56
NFKB1P19838 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NFKB1P19838 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.58■□□□□ 0.56
NFKB1P19838 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NFKB1P19838 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.57■□□□□ 0.56
NFKB1P19838 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.57■□□□□ 0.56
NFKB1P19838 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.57■□□□□ 0.56
NFKB1P19838 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NFKB1P19838 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 AC005521.1-201ENST00000393351 872 ntBASIC18.57■□□□□ 0.56
NFKB1P19838 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 COX11P1-201ENST00000489116 835 ntBASIC18.57■□□□□ 0.56
NFKB1P19838 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 AL441883.1-201ENST00000566170 1045 ntBASIC18.57■□□□□ 0.56
NFKB1P19838 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.57■□□□□ 0.56
NFKB1P19838 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.57■□□□□ 0.56
NFKB1P19838 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.57■□□□□ 0.56
NFKB1P19838 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NFKB1P19838 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.57■□□□□ 0.56
NFKB1P19838 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NFKB1P19838 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.57■□□□□ 0.56
NFKB1P19838 AC073508.3-201ENST00000619697 1419 ntBASIC18.57■□□□□ 0.56
NFKB1P19838 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NFKB1P19838 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.57■□□□□ 0.56
NFKB1P19838 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NFKB1P19838 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 AC138028.4-201ENST00000564984 1845 ntBASIC18.56■□□□□ 0.56
NFKB1P19838 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.56■□□□□ 0.56
NFKB1P19838 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.56■□□□□ 0.56
NFKB1P19838 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.56■□□□□ 0.56
NFKB1P19838 KRT18P57-201ENST00000443599 1254 ntBASIC18.56■□□□□ 0.56
NFKB1P19838 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.56■□□□□ 0.56
NFKB1P19838 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.56■□□□□ 0.56
NFKB1P19838 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.56■□□□□ 0.56
NFKB1P19838 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.56■□□□□ 0.56
NFKB1P19838 AC140113.3-201ENST00000605663 199 ntBASIC18.56■□□□□ 0.56
NFKB1P19838 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NFKB1P19838 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NFKB1P19838 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.56■□□□□ 0.56
NFKB1P19838 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.56■□□□□ 0.56
NFKB1P19838 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.56■□□□□ 0.56
NFKB1P19838 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NFKB1P19838 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.56■□□□□ 0.56
NFKB1P19838 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.56■□□□□ 0.56
NFKB1P19838 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms