Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.36■□□□□ 0.53
VCLP18206 AC104076.2-201ENST00000448912 469 ntBASIC18.36■□□□□ 0.53
VCLP18206 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.36■□□□□ 0.53
VCLP18206 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.36■□□□□ 0.53
VCLP18206 AC106820.2-201ENST00000563775 3264 ntBASIC18.36■□□□□ 0.53
VCLP18206 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.36■□□□□ 0.53
VCLP18206 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.36■□□□□ 0.53
VCLP18206 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.36■□□□□ 0.53
VCLP18206 AC008556.1-201ENST00000610908 2040 ntBASIC18.36■□□□□ 0.53
VCLP18206 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
VCLP18206 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
VCLP18206 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VCLP18206 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.35■□□□□ 0.53
VCLP18206 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.35■□□□□ 0.53
VCLP18206 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.35■□□□□ 0.53
VCLP18206 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.35■□□□□ 0.53
VCLP18206 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.35■□□□□ 0.53
VCLP18206 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.35■□□□□ 0.53
VCLP18206 MTMR9LP-203ENST00000426597 1545 ntBASIC18.35■□□□□ 0.53
VCLP18206 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 KRT8P7-201ENST00000533003 1432 ntBASIC18.35■□□□□ 0.53
VCLP18206 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VCLP18206 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VCLP18206 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.35■□□□□ 0.53
VCLP18206 TSPY5P-201ENST00000426936 936 ntBASIC18.35■□□□□ 0.53
VCLP18206 HOMER2P1-201ENST00000455653 964 ntBASIC18.35■□□□□ 0.53
VCLP18206 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.35■□□□□ 0.53
VCLP18206 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 AC010331.1-201ENST00000611423 582 ntBASIC18.35■□□□□ 0.53
VCLP18206 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VCLP18206 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
VCLP18206 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCLP18206 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.35■□□□□ 0.53
VCLP18206 PRORSD1P-202ENST00000563365 2154 ntBASIC18.35■□□□□ 0.53
VCLP18206 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.35■□□□□ 0.53
VCLP18206 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.35■□□□□ 0.53
VCLP18206 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 MIR564-202ENST00000385049 94 ntBASIC18.34■□□□□ 0.53
VCLP18206 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.34■□□□□ 0.53
VCLP18206 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.34■□□□□ 0.53
VCLP18206 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.34■□□□□ 0.53
VCLP18206 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VCLP18206 AL023973.1-201ENST00000624619 620 ntBASIC18.34■□□□□ 0.53
VCLP18206 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VCLP18206 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCLP18206 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VCLP18206 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.33■□□□□ 0.53
VCLP18206 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.33■□□□□ 0.53
VCLP18206 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
VCLP18206 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
VCLP18206 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VCLP18206 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
VCLP18206 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VCLP18206 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VCLP18206 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VCLP18206 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
VCLP18206 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms