Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.35■□□□□ 0.53
CTPS1P17812 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.35■□□□□ 0.53
CTPS1P17812 AC024563.2-201ENST00000603282 481 ntBASIC18.35■□□□□ 0.53
CTPS1P17812 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.35■□□□□ 0.53
CTPS1P17812 AL358472.4-201ENST00000633140 710 ntBASIC18.35■□□□□ 0.53
CTPS1P17812 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.35■□□□□ 0.53
CTPS1P17812 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CTPS1P17812 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTPS1P17812 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CTPS1P17812 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CTPS1P17812 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTPS1P17812 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTPS1P17812 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.34■□□□□ 0.53
CTPS1P17812 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS1P17812 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTPS1P17812 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS1P17812 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 AL645929.1-201ENST00000420084 975 ntBASIC18.34■□□□□ 0.53
CTPS1P17812 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS1P17812 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS1P17812 AL136038.3-201ENST00000561909 1096 ntBASIC18.34■□□□□ 0.53
CTPS1P17812 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTPS1P17812 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CTPS1P17812 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.34■□□□□ 0.53
CTPS1P17812 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.34■□□□□ 0.53
CTPS1P17812 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 AL162741.1-201ENST00000565563 1558 ntBASIC18.34■□□□□ 0.53
CTPS1P17812 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTPS1P17812 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.33■□□□□ 0.53
CTPS1P17812 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.33■□□□□ 0.53
CTPS1P17812 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS1P17812 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS1P17812 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS1P17812 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.33■□□□□ 0.53
CTPS1P17812 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTPS1P17812 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.33■□□□□ 0.53
CTPS1P17812 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CTPS1P17812 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CTPS1P17812 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS1P17812 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS1P17812 MIR662-201ENST00000384847 95 ntBASIC18.33■□□□□ 0.52
CTPS1P17812 PCED1CP-201ENST00000419887 785 ntBASIC18.33■□□□□ 0.52
CTPS1P17812 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTPS1P17812 KRT18P48-201ENST00000434763 852 ntBASIC18.33■□□□□ 0.52
CTPS1P17812 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.33■□□□□ 0.52
CTPS1P17812 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.33■□□□□ 0.52
CTPS1P17812 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.33■□□□□ 0.52
CTPS1P17812 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.33■□□□□ 0.52
CTPS1P17812 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.33■□□□□ 0.52
CTPS1P17812 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.33■□□□□ 0.52
CTPS1P17812 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS1P17812 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CTPS1P17812 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS1P17812 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS1P17812 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS1P17812 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CTPS1P17812 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS1P17812 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTPS1P17812 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms