Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 BX323043.1-201ENST00000641006 1765 ntBASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 AC093503.3-201ENST00000624917 2352 ntBASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 RN7SL606P-201ENST00000472779 293 ntBASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRGAP2CP0DJJ0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 AL450487.1-201ENST00000426799 995 ntBASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 AC113404.2-201ENST00000507884 177 ntBASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 TNXA-203ENST00000507684 2038 ntBASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 LINC00602-201ENST00000629776 2065 ntBASIC20.03■□□□□ 0.8
SRGAP2CP0DJJ0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRGAP2CP0DJJ0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRGAP2CP0DJJ0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.02■□□□□ 0.79
SRGAP2CP0DJJ0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SRGAP2CP0DJJ0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRGAP2CP0DJJ0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 GMCL1P1-201ENST00000463439 1581 ntBASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 AC233702.3-201ENST00000578656 1387 ntBASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRGAP2CP0DJJ0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms