Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 RPS2P55-201ENST00000397318 883 ntBASIC15.8■□□□□ 0.12
CSF1P09603 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.8■□□□□ 0.12
CSF1P09603 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.8■□□□□ 0.12
CSF1P09603 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.8■□□□□ 0.12
CSF1P09603 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.8■□□□□ 0.12
CSF1P09603 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.8■□□□□ 0.12
CSF1P09603 AC107956.1-201ENST00000494359 873 ntBASIC15.8■□□□□ 0.12
CSF1P09603 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.8■□□□□ 0.12
CSF1P09603 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.8■□□□□ 0.12
CSF1P09603 AC233702.5-201ENST00000584107 538 ntBASIC15.8■□□□□ 0.12
CSF1P09603 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CSF1P09603 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CSF1P09603 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.8■□□□□ 0.12
CSF1P09603 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 AC008556.1-201ENST00000610908 2040 ntBASIC15.8■□□□□ 0.12
CSF1P09603 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CSF1P09603 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 AC084018.2-201ENST00000613093 2607 ntBASIC15.8■□□□□ 0.12
CSF1P09603 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSF1P09603 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CSF1P09603 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CSF1P09603 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CSF1P09603 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CSF1P09603 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 AC108860.2-201ENST00000562760 2183 ntBASIC15.79■□□□□ 0.12
CSF1P09603 AL135905.2-201ENST00000584934 1404 ntBASIC15.79■□□□□ 0.12
CSF1P09603 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.79■□□□□ 0.12
CSF1P09603 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.79■□□□□ 0.12
CSF1P09603 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CSF1P09603 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.79■□□□□ 0.12
CSF1P09603 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 BX088651.1-201ENST00000540551 451 ntBASIC15.79■□□□□ 0.12
CSF1P09603 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.79■□□□□ 0.12
CSF1P09603 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.79■□□□□ 0.12
CSF1P09603 AL023875.1-201ENST00000640777 796 ntBASIC15.79■□□□□ 0.12
CSF1P09603 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CSF1P09603 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 AD000864.1-201ENST00000624076 2295 ntBASIC15.79■□□□□ 0.12
CSF1P09603 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSF1P09603 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CSF1P09603 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSF1P09603 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.78■□□□□ 0.12
CSF1P09603 AC080080.1-201ENST00000625121 2420 ntBASIC15.78■□□□□ 0.12
CSF1P09603 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.78■□□□□ 0.12
CSF1P09603 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.78■□□□□ 0.12
CSF1P09603 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.78■□□□□ 0.12
CSF1P09603 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CSF1P09603 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CSF1P09603 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CSF1P09603 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.78■□□□□ 0.12
CSF1P09603 TSPY7P-201ENST00000431358 1114 ntBASIC15.78■□□□□ 0.12
CSF1P09603 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CSF1P09603 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSF1P09603 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.78■□□□□ 0.12
CSF1P09603 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms