Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 FAM8A6P-201ENST00000407496 1135 ntBASIC18.51■□□□□ 0.55
HLA-DQB2P05538 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 HBZP1-201ENST00000354915 429 ntBASIC18.5■□□□□ 0.55
HLA-DQB2P05538 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.5■□□□□ 0.55
HLA-DQB2P05538 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
HLA-DQB2P05538 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQB2P05538 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 AC018470.1-201ENST00000624790 3129 ntBASIC18.48■□□□□ 0.55
HLA-DQB2P05538 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.48■□□□□ 0.55
HLA-DQB2P05538 VENTXP5-201ENST00000523979 775 ntBASIC18.48■□□□□ 0.55
HLA-DQB2P05538 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms