Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGN1P05114 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGN1P05114 B3GAT3P1-201ENST00000471720 806 ntBASIC16.56■□□□□ 0.24
HMGN1P05114 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HMGN1P05114 AC090192.1-201ENST00000517740 490 ntBASIC16.56■□□□□ 0.24
HMGN1P05114 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGN1P05114 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HMGN1P05114 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN1P05114 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HMGN1P05114 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN1P05114 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HMGN1P05114 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HMGN1P05114 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN1P05114 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN1P05114 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGN1P05114 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN1P05114 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.55■□□□□ 0.24
HMGN1P05114 AF186192.3-201ENST00000583427 947 ntBASIC16.55■□□□□ 0.24
HMGN1P05114 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN1P05114 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGN1P05114 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN1P05114 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN1P05114 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGN1P05114 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN1P05114 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HMGN1P05114 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
HMGN1P05114 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN1P05114 PRORSD1P-202ENST00000563365 2154 ntBASIC16.54■□□□□ 0.24
HMGN1P05114 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HMGN1P05114 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HMGN1P05114 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN1P05114 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.54■□□□□ 0.24
HMGN1P05114 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 HLA-L-209ENST00000420110 1011 ntBASIC16.54■□□□□ 0.24
HMGN1P05114 RARRES2P10-201ENST00000564312 460 ntBASIC16.54■□□□□ 0.24
HMGN1P05114 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN1P05114 AC073648.6-201ENST00000641589 218 ntBASIC16.54■□□□□ 0.24
HMGN1P05114 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.54■□□□□ 0.24
HMGN1P05114 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HMGN1P05114 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HMGN1P05114 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HMGN1P05114 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN1P05114 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN1P05114 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGN1P05114 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGN1P05114 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms