Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.06■□□□□ 0.32
PDGFAP04085 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFAP04085 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.06■□□□□ 0.32
PDGFAP04085 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PDGFAP04085 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PDGFAP04085 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.06■□□□□ 0.32
PDGFAP04085 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.06■□□□□ 0.32
PDGFAP04085 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.06■□□□□ 0.32
PDGFAP04085 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.06■□□□□ 0.32
PDGFAP04085 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.06■□□□□ 0.32
PDGFAP04085 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.06■□□□□ 0.32
PDGFAP04085 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.06■□□□□ 0.32
PDGFAP04085 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFAP04085 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.06■□□□□ 0.32
PDGFAP04085 AC090616.6-201ENST00000582640 721 ntBASIC17.06■□□□□ 0.32
PDGFAP04085 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.06■□□□□ 0.32
PDGFAP04085 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PDGFAP04085 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PDGFAP04085 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.06■□□□□ 0.32
PDGFAP04085 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDGFAP04085 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PDGFAP04085 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PDGFAP04085 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFAP04085 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PDGFAP04085 HLA-A-201ENST00000376802 1334 ntBASIC17.05■□□□□ 0.32
PDGFAP04085 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.05■□□□□ 0.32
PDGFAP04085 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFAP04085 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFAP04085 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFAP04085 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFAP04085 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFAP04085 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.04■□□□□ 0.32
PDGFAP04085 HOXB1-202ENST00000577092 1414 ntBASIC17.04■□□□□ 0.32
PDGFAP04085 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFAP04085 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDGFAP04085 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 IGHV3-47-201ENST00000425060 335 ntBASIC17.04■□□□□ 0.32
PDGFAP04085 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFAP04085 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.04■□□□□ 0.32
PDGFAP04085 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFAP04085 AL662844.1-201ENST00000546340 181 ntBASIC17.04■□□□□ 0.32
PDGFAP04085 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.04■□□□□ 0.32
PDGFAP04085 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PDGFAP04085 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFAP04085 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDGFAP04085 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDGFAP04085 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDGFAP04085 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDGFAP04085 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFAP04085 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.04■□□□□ 0.32
PDGFAP04085 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFAP04085 Z82202.1-201ENST00000623446 1880 ntBASIC17.03■□□□□ 0.32
PDGFAP04085 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFAP04085 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms