Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 AL354751.1-201ENST00000412768 1863 ntBASIC20.2■□□□□ 0.82
CLSTN1O94985 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.2■□□□□ 0.82
CLSTN1O94985 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.2■□□□□ 0.82
CLSTN1O94985 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CLSTN1O94985 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
CLSTN1O94985 AC145285.6-201ENST00000604632 637 ntBASIC20.2■□□□□ 0.82
CLSTN1O94985 AC005363.2-201ENST00000618631 242 ntBASIC20.2■□□□□ 0.82
CLSTN1O94985 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
CLSTN1O94985 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLSTN1O94985 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLSTN1O94985 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 HEIH-201ENST00000623091 1652 ntBASIC20.19■□□□□ 0.82
CLSTN1O94985 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.19■□□□□ 0.82
CLSTN1O94985 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.19■□□□□ 0.82
CLSTN1O94985 AC092338.2-201ENST00000568827 1415 ntBASIC20.19■□□□□ 0.82
CLSTN1O94985 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 Z98044.1-201ENST00000632503 1764 ntBASIC20.19■□□□□ 0.82
CLSTN1O94985 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.19■□□□□ 0.82
CLSTN1O94985 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.19■□□□□ 0.82
CLSTN1O94985 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CLSTN1O94985 MIR4674-201ENST00000582457 87 ntBASIC20.19■□□□□ 0.82
CLSTN1O94985 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.19■□□□□ 0.82
CLSTN1O94985 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.19■□□□□ 0.82
CLSTN1O94985 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CLSTN1O94985 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 NOC2LP1-202ENST00000452600 2235 ntBASIC20.19■□□□□ 0.82
CLSTN1O94985 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CLSTN1O94985 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.19■□□□□ 0.82
CLSTN1O94985 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
CLSTN1O94985 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.19■□□□□ 0.82
CLSTN1O94985 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLSTN1O94985 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLSTN1O94985 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 HMGA1P5-201ENST00000412453 271 ntBASIC20.18■□□□□ 0.82
CLSTN1O94985 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.18■□□□□ 0.82
CLSTN1O94985 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.18■□□□□ 0.82
CLSTN1O94985 AL023803.3-201ENST00000615559 522 ntBASIC20.18■□□□□ 0.82
CLSTN1O94985 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.18■□□□□ 0.82
CLSTN1O94985 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.18■□□□□ 0.82
CLSTN1O94985 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.18■□□□□ 0.82
CLSTN1O94985 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.18■□□□□ 0.82
CLSTN1O94985 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLSTN1O94985 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.18■□□□□ 0.82
CLSTN1O94985 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.18■□□□□ 0.82
CLSTN1O94985 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.17■□□□□ 0.82
CLSTN1O94985 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms