Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF254O75437 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF254O75437 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF254O75437 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF254O75437 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF254O75437 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF254O75437 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF254O75437 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF254O75437 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF254O75437 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF254O75437 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF254O75437 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF254O75437 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF254O75437 GMCL1P1-201ENST00000463439 1581 ntBASIC16.21■□□□□ 0.18
ZNF254O75437 GPAT2P1-201ENST00000444924 1672 ntBASIC16.21■□□□□ 0.18
ZNF254O75437 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF254O75437 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF254O75437 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF254O75437 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF254O75437 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ZNF254O75437 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 FLJ13224-201ENST00000313737 1514 ntBASIC16.2■□□□□ 0.18
ZNF254O75437 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
ZNF254O75437 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
ZNF254O75437 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF254O75437 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF254O75437 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF254O75437 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF254O75437 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF254O75437 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF254O75437 REXO1L9P-201ENST00000604264 2108 ntBASIC16.2■□□□□ 0.18
ZNF254O75437 ITM2C-210ENST00000620962 501 ntBASIC16.2■□□□□ 0.18
ZNF254O75437 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF254O75437 OR6D1P-202ENST00000641007 5290 ntBASIC16.2■□□□□ 0.18
ZNF254O75437 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF254O75437 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF254O75437 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF254O75437 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF254O75437 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 AC012313.1-201ENST00000593393 3059 ntBASIC16.19■□□□□ 0.18
ZNF254O75437 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF254O75437 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF254O75437 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF254O75437 MIR3180-5-201ENST00000583743 153 ntBASIC16.19■□□□□ 0.18
ZNF254O75437 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF254O75437 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF254O75437 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF254O75437 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF254O75437 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF254O75437 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ZNF254O75437 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF254O75437 KRT8P50-201ENST00000562022 1438 ntBASIC16.19■□□□□ 0.18
ZNF254O75437 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF254O75437 C8orf49-201ENST00000525043 1968 ntBASIC16.18■□□□□ 0.18
ZNF254O75437 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ZNF254O75437 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ZNF254O75437 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF254O75437 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF254O75437 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF254O75437 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF254O75437 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF254O75437 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF254O75437 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF254O75437 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms