Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LRCH4O75427 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19■□□□□ 0.63
LRCH4O75427 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19■□□□□ 0.63
LRCH4O75427 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRCH4O75427 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19■□□□□ 0.63
LRCH4O75427 AC211429.1-201ENST00000415277 523 ntBASIC19■□□□□ 0.63
LRCH4O75427 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19■□□□□ 0.63
LRCH4O75427 COX11P1-201ENST00000489116 835 ntBASIC19■□□□□ 0.63
LRCH4O75427 AL441883.1-201ENST00000566170 1045 ntBASIC19■□□□□ 0.63
LRCH4O75427 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19■□□□□ 0.63
LRCH4O75427 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19■□□□□ 0.63
LRCH4O75427 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRCH4O75427 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRCH4O75427 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19■□□□□ 0.63
LRCH4O75427 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH4O75427 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.99■□□□□ 0.63
LRCH4O75427 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.99■□□□□ 0.63
LRCH4O75427 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LRCH4O75427 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
LRCH4O75427 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRCH4O75427 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LRCH4O75427 AL137013.1-201ENST00000432946 1228 ntBASIC18.99■□□□□ 0.63
LRCH4O75427 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.99■□□□□ 0.63
LRCH4O75427 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.99■□□□□ 0.63
LRCH4O75427 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.99■□□□□ 0.63
LRCH4O75427 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LRCH4O75427 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRCH4O75427 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LRCH4O75427 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH4O75427 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.99■□□□□ 0.63
LRCH4O75427 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.98■□□□□ 0.63
LRCH4O75427 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRCH4O75427 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.98■□□□□ 0.63
LRCH4O75427 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 AC005521.1-201ENST00000393351 872 ntBASIC18.98■□□□□ 0.63
LRCH4O75427 SLC25A6P5-201ENST00000435663 894 ntBASIC18.98■□□□□ 0.63
LRCH4O75427 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.98■□□□□ 0.63
LRCH4O75427 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.98■□□□□ 0.63
LRCH4O75427 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LRCH4O75427 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.98■□□□□ 0.63
LRCH4O75427 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.98■□□□□ 0.63
LRCH4O75427 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.98■□□□□ 0.63
LRCH4O75427 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.98■□□□□ 0.63
LRCH4O75427 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LRCH4O75427 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LRCH4O75427 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH4O75427 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.98■□□□□ 0.63
LRCH4O75427 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LRCH4O75427 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.97■□□□□ 0.63
LRCH4O75427 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LRCH4O75427 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.97■□□□□ 0.63
LRCH4O75427 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRCH4O75427 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms