Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.68□□□□□ -0.22
SH2D1AO60880 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.68□□□□□ -0.22
SH2D1AO60880 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SH2D1AO60880 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.68□□□□□ -0.22
SH2D1AO60880 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SH2D1AO60880 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SH2D1AO60880 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SH2D1AO60880 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.67□□□□□ -0.22
SH2D1AO60880 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
SH2D1AO60880 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.67□□□□□ -0.22
SH2D1AO60880 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.67□□□□□ -0.22
SH2D1AO60880 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
SH2D1AO60880 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.67□□□□□ -0.22
SH2D1AO60880 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.67□□□□□ -0.22
SH2D1AO60880 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SH2D1AO60880 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SH2D1AO60880 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SH2D1AO60880 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.67□□□□□ -0.22
SH2D1AO60880 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 AC006116.8-202ENST00000587620 1550 ntBASIC13.66□□□□□ -0.22
SH2D1AO60880 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SH2D1AO60880 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 AL109659.2-201ENST00000606809 1674 ntBASIC13.66□□□□□ -0.22
SH2D1AO60880 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.66□□□□□ -0.22
SH2D1AO60880 AC004980.1-204ENST00000429707 299 ntBASIC13.66□□□□□ -0.22
SH2D1AO60880 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.66□□□□□ -0.22
SH2D1AO60880 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 AC091390.4-202ENST00000476426 537 ntBASIC13.66□□□□□ -0.22
SH2D1AO60880 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.66□□□□□ -0.22
SH2D1AO60880 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.66□□□□□ -0.22
SH2D1AO60880 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.66□□□□□ -0.22
SH2D1AO60880 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.66□□□□□ -0.22
SH2D1AO60880 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.66□□□□□ -0.22
SH2D1AO60880 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SH2D1AO60880 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.66□□□□□ -0.22
SH2D1AO60880 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SH2D1AO60880 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SH2D1AO60880 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.66□□□□□ -0.22
SH2D1AO60880 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SH2D1AO60880 PP12613-201ENST00000424958 2230 ntBASIC13.66□□□□□ -0.22
SH2D1AO60880 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
SH2D1AO60880 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SH2D1AO60880 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms