Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 ARSEP1-201ENST00000420443 635 ntBASIC17.65■□□□□ 0.42
GFRA3O60609 CRB3P1-201ENST00000449338 276 ntBASIC17.65■□□□□ 0.42
GFRA3O60609 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.65■□□□□ 0.42
GFRA3O60609 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.65■□□□□ 0.42
GFRA3O60609 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.65■□□□□ 0.42
GFRA3O60609 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
GFRA3O60609 AC022145.2-201ENST00000598203 171 ntBASIC17.65■□□□□ 0.42
GFRA3O60609 AL353135.1-201ENST00000606729 504 ntBASIC17.65■□□□□ 0.42
GFRA3O60609 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.65■□□□□ 0.42
GFRA3O60609 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.65■□□□□ 0.42
GFRA3O60609 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
GFRA3O60609 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GFRA3O60609 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GFRA3O60609 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.64■□□□□ 0.42
GFRA3O60609 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.64■□□□□ 0.42
GFRA3O60609 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GFRA3O60609 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.64■□□□□ 0.41
GFRA3O60609 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GFRA3O60609 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GFRA3O60609 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.64■□□□□ 0.41
GFRA3O60609 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.64■□□□□ 0.41
GFRA3O60609 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GFRA3O60609 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GFRA3O60609 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.64■□□□□ 0.41
GFRA3O60609 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GFRA3O60609 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.64■□□□□ 0.41
GFRA3O60609 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GFRA3O60609 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
GFRA3O60609 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.64■□□□□ 0.41
GFRA3O60609 NME2P1-201ENST00000426182 414 ntBASIC17.64■□□□□ 0.41
GFRA3O60609 AC074386.1-202ENST00000463561 864 ntBASIC17.64■□□□□ 0.41
GFRA3O60609 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GFRA3O60609 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.64■□□□□ 0.41
GFRA3O60609 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.64■□□□□ 0.41
GFRA3O60609 AC009154.2-201ENST00000621177 724 ntBASIC17.64■□□□□ 0.41
GFRA3O60609 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GFRA3O60609 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GFRA3O60609 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GFRA3O60609 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.64■□□□□ 0.41
GFRA3O60609 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GFRA3O60609 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.64■□□□□ 0.41
GFRA3O60609 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.63■□□□□ 0.41
GFRA3O60609 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.63■□□□□ 0.41
GFRA3O60609 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.63■□□□□ 0.41
GFRA3O60609 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GFRA3O60609 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.63■□□□□ 0.41
GFRA3O60609 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.63■□□□□ 0.41
GFRA3O60609 CNN2P2-201ENST00000443536 909 ntBASIC17.63■□□□□ 0.41
GFRA3O60609 CNN2P3-201ENST00000450201 906 ntBASIC17.63■□□□□ 0.41
GFRA3O60609 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.63■□□□□ 0.41
GFRA3O60609 AL136317.3-201ENST00000618497 906 ntBASIC17.63■□□□□ 0.41
GFRA3O60609 AC004790.2-201ENST00000623588 572 ntBASIC17.63■□□□□ 0.41
GFRA3O60609 AC092902.6-201ENST00000641783 218 ntBASIC17.63■□□□□ 0.41
GFRA3O60609 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GFRA3O60609 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GFRA3O60609 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GFRA3O60609 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.62■□□□□ 0.41
GFRA3O60609 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.62■□□□□ 0.41
GFRA3O60609 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
GFRA3O60609 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GFRA3O60609 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.62■□□□□ 0.41
GFRA3O60609 AC003669.1-201ENST00000334569 611 ntBASIC17.62■□□□□ 0.41
GFRA3O60609 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.62■□□□□ 0.41
GFRA3O60609 MIR943-201ENST00000401286 94 ntBASIC17.62■□□□□ 0.41
GFRA3O60609 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.62■□□□□ 0.41
GFRA3O60609 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.62■□□□□ 0.41
GFRA3O60609 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GFRA3O60609 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.62■□□□□ 0.41
GFRA3O60609 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.62■□□□□ 0.41
GFRA3O60609 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.62■□□□□ 0.41
GFRA3O60609 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.62■□□□□ 0.41
GFRA3O60609 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.62■□□□□ 0.41
GFRA3O60609 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.62■□□□□ 0.41
GFRA3O60609 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 KRT8P32-201ENST00000512863 1461 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms