Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIPA1L3O60292 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIPA1L3O60292 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.26■■□□□ 1.31
SIPA1L3O60292 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.26■■□□□ 1.31
SIPA1L3O60292 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC23.26■■□□□ 1.31
SIPA1L3O60292 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.26■■□□□ 1.31
SIPA1L3O60292 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIPA1L3O60292 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIPA1L3O60292 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 AF186996.4-201ENST00000467186 377 ntBASIC23.25■■□□□ 1.31
SIPA1L3O60292 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIPA1L3O60292 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 AC012640.2-201ENST00000561606 901 ntBASIC23.25■■□□□ 1.31
SIPA1L3O60292 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SIPA1L3O60292 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIPA1L3O60292 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIPA1L3O60292 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.25■■□□□ 1.31
SIPA1L3O60292 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIPA1L3O60292 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 AC073648.2-201ENST00000510116 352 ntBASIC23.24■■□□□ 1.31
SIPA1L3O60292 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 AC139887.3-201ENST00000568585 713 ntBASIC23.24■■□□□ 1.31
SIPA1L3O60292 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIPA1L3O60292 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SIPA1L3O60292 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIPA1L3O60292 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.24■■□□□ 1.31
SIPA1L3O60292 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SIPA1L3O60292 MTDHP3-201ENST00000594186 672 ntBASIC23.24■■□□□ 1.31
SIPA1L3O60292 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SIPA1L3O60292 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIPA1L3O60292 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIPA1L3O60292 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
SIPA1L3O60292 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.23■■□□□ 1.31
SIPA1L3O60292 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.23■■□□□ 1.31
SIPA1L3O60292 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SIPA1L3O60292 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIPA1L3O60292 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.23■■□□□ 1.31
SIPA1L3O60292 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIPA1L3O60292 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.23■■□□□ 1.31
SIPA1L3O60292 AC021087.4-201ENST00000563761 564 ntBASIC23.23■■□□□ 1.31
SIPA1L3O60292 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.23■■□□□ 1.31
SIPA1L3O60292 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SIPA1L3O60292 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIPA1L3O60292 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIPA1L3O60292 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 AC079776.4-201ENST00000511039 504 ntBASIC23.22■■□□□ 1.31
SIPA1L3O60292 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 MIR574-201ENST00000385209 96 ntBASIC23.22■■□□□ 1.31
SIPA1L3O60292 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.22■■□□□ 1.31
SIPA1L3O60292 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.22■■□□□ 1.31
SIPA1L3O60292 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIPA1L3O60292 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SIPA1L3O60292 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SIPA1L3O60292 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SIPA1L3O60292 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.21■■□□□ 1.31
SIPA1L3O60292 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SIPA1L3O60292 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SIPA1L3O60292 AC079776.2-201ENST00000641154 1609 ntBASIC23.21■■□□□ 1.31
SIPA1L3O60292 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.21■■□□□ 1.31
SIPA1L3O60292 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SIPA1L3O60292 PMS2P1-201ENST00000431037 1228 ntBASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms