Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 POU5F1P3-201ENST00000428824 1078 ntBASIC14.91□□□□□ -0.02
SSSCA1O60232 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.91□□□□□ -0.02
SSSCA1O60232 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.91□□□□□ -0.02
SSSCA1O60232 AC008687.6-201ENST00000596318 630 ntBASIC14.91□□□□□ -0.02
SSSCA1O60232 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.91□□□□□ -0.02
SSSCA1O60232 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.91□□□□□ -0.02
SSSCA1O60232 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.91□□□□□ -0.02
SSSCA1O60232 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 RCC2P3-201ENST00000418112 1537 ntBASIC14.91□□□□□ -0.02
SSSCA1O60232 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.91□□□□□ -0.02
SSSCA1O60232 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 KRT8P11-201ENST00000409686 1436 ntBASIC14.91□□□□□ -0.02
SSSCA1O60232 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.91□□□□□ -0.02
SSSCA1O60232 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SSSCA1O60232 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.9□□□□□ -0.02
SSSCA1O60232 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.9□□□□□ -0.02
SSSCA1O60232 PRKY-204ENST00000533551 1019 ntBASIC14.9□□□□□ -0.02
SSSCA1O60232 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 AC073111.5-205ENST00000641717 521 ntBASIC14.9□□□□□ -0.02
SSSCA1O60232 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.9□□□□□ -0.02
SSSCA1O60232 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SSSCA1O60232 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 HTR7P1-201ENST00000538670 1336 ntBASIC14.9□□□□□ -0.02
SSSCA1O60232 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SSSCA1O60232 GMCL1P1-201ENST00000463439 1581 ntBASIC14.9□□□□□ -0.02
SSSCA1O60232 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSSCA1O60232 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSSCA1O60232 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSSCA1O60232 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSSCA1O60232 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.89□□□□□ -0.03
SSSCA1O60232 AL023806.1-201ENST00000603994 1649 ntBASIC14.89□□□□□ -0.03
SSSCA1O60232 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms