Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC28A2O43868 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SLC28A2O43868 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SLC28A2O43868 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC28A2O43868 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC28A2O43868 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SLC28A2O43868 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC28A2O43868 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
SLC28A2O43868 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.6■□□□□ 0.41
SLC28A2O43868 AL160237.2-201ENST00000556165 472 ntBASIC17.6■□□□□ 0.41
SLC28A2O43868 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.6■□□□□ 0.41
SLC28A2O43868 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SLC28A2O43868 HYMAI.1-201ENST00000620949 238 ntBASIC17.6■□□□□ 0.41
SLC28A2O43868 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC28A2O43868 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC28A2O43868 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC28A2O43868 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC28A2O43868 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC28A2O43868 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC28A2O43868 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC28A2O43868 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC28A2O43868 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC28A2O43868 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC28A2O43868 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC28A2O43868 TSSC2-201ENST00000450217 709 ntBASIC17.59■□□□□ 0.41
SLC28A2O43868 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC28A2O43868 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.59■□□□□ 0.41
SLC28A2O43868 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC28A2O43868 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC28A2O43868 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC28A2O43868 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC28A2O43868 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC28A2O43868 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC28A2O43868 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC28A2O43868 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
SLC28A2O43868 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SLC28A2O43868 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC28A2O43868 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC28A2O43868 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC28A2O43868 AC007613.1-201ENST00000572811 2597 ntBASIC17.58■□□□□ 0.41
SLC28A2O43868 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC28A2O43868 KRT8P11-201ENST00000409686 1436 ntBASIC17.58■□□□□ 0.41
SLC28A2O43868 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SLC28A2O43868 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
SLC28A2O43868 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC28A2O43868 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC28A2O43868 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC28A2O43868 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC28A2O43868 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC28A2O43868 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC28A2O43868 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC28A2O43868 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC28A2O43868 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC28A2O43868 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC28A2O43868 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC28A2O43868 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC28A2O43868 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC28A2O43868 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SLC28A2O43868 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms