Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.35■□□□□ 0.37
PROM1O43490 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PROM1O43490 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PROM1O43490 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PROM1O43490 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.35■□□□□ 0.37
PROM1O43490 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PROM1O43490 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PROM1O43490 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PROM1O43490 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PROM1O43490 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PROM1O43490 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PROM1O43490 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PROM1O43490 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PROM1O43490 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.34■□□□□ 0.37
PROM1O43490 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PROM1O43490 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.34■□□□□ 0.37
PROM1O43490 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PROM1O43490 AC117947.1-201ENST00000427448 529 ntBASIC17.34■□□□□ 0.37
PROM1O43490 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.34■□□□□ 0.37
PROM1O43490 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.34■□□□□ 0.37
PROM1O43490 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PROM1O43490 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.34■□□□□ 0.37
PROM1O43490 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PROM1O43490 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.34■□□□□ 0.37
PROM1O43490 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PROM1O43490 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.34■□□□□ 0.37
PROM1O43490 AL049597.2-201ENST00000565575 961 ntBASIC17.34■□□□□ 0.37
PROM1O43490 AC093677.2-201ENST00000600169 1863 ntBASIC17.34■□□□□ 0.37
PROM1O43490 AL590326.2-201ENST00000625139 305 ntBASIC17.34■□□□□ 0.37
PROM1O43490 AL157888.1-201ENST00000631930 593 ntBASIC17.34■□□□□ 0.37
PROM1O43490 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PROM1O43490 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PROM1O43490 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
PROM1O43490 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PROM1O43490 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PROM1O43490 BCL2-203ENST00000589955 5011 ntBASIC17.33■□□□□ 0.37
PROM1O43490 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PROM1O43490 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.33■□□□□ 0.37
PROM1O43490 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PROM1O43490 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PROM1O43490 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.33■□□□□ 0.37
PROM1O43490 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PROM1O43490 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PROM1O43490 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PROM1O43490 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PROM1O43490 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.33■□□□□ 0.37
PROM1O43490 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.33■□□□□ 0.36
PROM1O43490 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PROM1O43490 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.33■□□□□ 0.36
PROM1O43490 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.33■□□□□ 0.36
PROM1O43490 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.33■□□□□ 0.36
PROM1O43490 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.33■□□□□ 0.36
PROM1O43490 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.33■□□□□ 0.36
PROM1O43490 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.33■□□□□ 0.36
PROM1O43490 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.33■□□□□ 0.36
PROM1O43490 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.33■□□□□ 0.36
PROM1O43490 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.33■□□□□ 0.36
PROM1O43490 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.33■□□□□ 0.36
PROM1O43490 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.33■□□□□ 0.36
PROM1O43490 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PROM1O43490 AL354751.1-201ENST00000412768 1863 ntBASIC17.33■□□□□ 0.36
PROM1O43490 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PROM1O43490 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PROM1O43490 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PROM1O43490 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PROM1O43490 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PROM1O43490 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.32■□□□□ 0.36
PROM1O43490 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms