Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.8■□□□□ 0.12
PHF1O43189 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.8■□□□□ 0.12
PHF1O43189 TSPY23P-201ENST00000440136 739 ntBASIC15.8■□□□□ 0.12
PHF1O43189 TSPY17P-201ENST00000450329 467 ntBASIC15.8■□□□□ 0.12
PHF1O43189 AL671277.2-201ENST00000458060 996 ntBASIC15.8■□□□□ 0.12
PHF1O43189 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.8■□□□□ 0.12
PHF1O43189 GPALPP1-207ENST00000611650 899 ntBASIC15.8■□□□□ 0.12
PHF1O43189 AL023803.3-201ENST00000615559 522 ntBASIC15.8■□□□□ 0.12
PHF1O43189 AC011558.1-201ENST00000623459 338 ntBASIC15.8■□□□□ 0.12
PHF1O43189 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PHF1O43189 NOC2LP1-202ENST00000452600 2235 ntBASIC15.8■□□□□ 0.12
PHF1O43189 FZD10-202ENST00000539839 3282 ntBASIC15.8■□□□□ 0.12
PHF1O43189 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PHF1O43189 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.8■□□□□ 0.12
PHF1O43189 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.8■□□□□ 0.12
PHF1O43189 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.8■□□□□ 0.12
PHF1O43189 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.8■□□□□ 0.12
PHF1O43189 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PHF1O43189 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.79■□□□□ 0.12
PHF1O43189 AC092338.2-201ENST00000568827 1415 ntBASIC15.79■□□□□ 0.12
PHF1O43189 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.79■□□□□ 0.12
PHF1O43189 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PHF1O43189 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 HOMER2P1-201ENST00000455653 964 ntBASIC15.79■□□□□ 0.12
PHF1O43189 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.79■□□□□ 0.12
PHF1O43189 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.79■□□□□ 0.12
PHF1O43189 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PHF1O43189 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
PHF1O43189 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.79■□□□□ 0.12
PHF1O43189 AC012313.10-201ENST00000623509 926 ntBASIC15.79■□□□□ 0.12
PHF1O43189 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PHF1O43189 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.79■□□□□ 0.12
PHF1O43189 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHF1O43189 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PHF1O43189 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PHF1O43189 AC005332.1-201ENST00000577698 1310 ntBASIC15.78■□□□□ 0.12
PHF1O43189 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.78■□□□□ 0.12
PHF1O43189 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PHF1O43189 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PHF1O43189 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 AL359075.1-203ENST00000462729 1002 ntBASIC15.78■□□□□ 0.12
PHF1O43189 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.78■□□□□ 0.12
PHF1O43189 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 AL353719.1-201ENST00000566847 864 ntBASIC15.78■□□□□ 0.12
PHF1O43189 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.78■□□□□ 0.12
PHF1O43189 AC116407.4-201ENST00000623319 1061 ntBASIC15.78■□□□□ 0.12
PHF1O43189 AC141257.4-201ENST00000634557 245 ntBASIC15.78■□□□□ 0.12
PHF1O43189 AC136944.6-201ENST00000634818 245 ntBASIC15.78■□□□□ 0.12
PHF1O43189 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.78■□□□□ 0.12
PHF1O43189 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.78■□□□□ 0.12
PHF1O43189 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHF1O43189 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.78■□□□□ 0.12
PHF1O43189 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.78■□□□□ 0.12
PHF1O43189 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PHF1O43189 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHF1O43189 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHF1O43189 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHF1O43189 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms