Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NDUFA1O15239 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.52□□□□□ -0.41
NDUFA1O15239 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.52□□□□□ -0.41
NDUFA1O15239 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFA1O15239 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
NDUFA1O15239 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFA1O15239 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFA1O15239 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFA1O15239 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NDUFA1O15239 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.51□□□□□ -0.41
NDUFA1O15239 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFA1O15239 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFA1O15239 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 AC008556.1-201ENST00000610908 2040 ntBASIC12.51□□□□□ -0.41
NDUFA1O15239 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NDUFA1O15239 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.51□□□□□ -0.41
NDUFA1O15239 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 AL355802.2-201ENST00000402069 882 ntBASIC12.51□□□□□ -0.41
NDUFA1O15239 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 AP003097.1-201ENST00000530657 1135 ntBASIC12.51□□□□□ -0.41
NDUFA1O15239 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NDUFA1O15239 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NDUFA1O15239 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.51□□□□□ -0.41
NDUFA1O15239 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.51□□□□□ -0.41
NDUFA1O15239 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFA1O15239 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.51□□□□□ -0.41
NDUFA1O15239 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.51□□□□□ -0.41
NDUFA1O15239 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.51□□□□□ -0.41
NDUFA1O15239 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
NDUFA1O15239 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
NDUFA1O15239 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFA1O15239 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFA1O15239 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFA1O15239 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NDUFA1O15239 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
NDUFA1O15239 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFA1O15239 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA1O15239 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA1O15239 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA1O15239 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA1O15239 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA1O15239 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA1O15239 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA1O15239 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFA1O15239 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFA1O15239 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFA1O15239 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.5□□□□□ -0.41
NDUFA1O15239 HLA-A-209ENST00000638375 975 ntBASIC12.5□□□□□ -0.41
NDUFA1O15239 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFA1O15239 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms