Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX4O14627 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDX4O14627 AC097374.2-201ENST00000618617 1306 ntBASIC17.52■□□□□ 0.4
CDX4O14627 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX4O14627 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDX4O14627 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDX4O14627 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX4O14627 AC079776.2-201ENST00000641154 1609 ntBASIC17.52■□□□□ 0.4
CDX4O14627 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX4O14627 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.52■□□□□ 0.4
CDX4O14627 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDX4O14627 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.52■□□□□ 0.4
CDX4O14627 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.52■□□□□ 0.4
CDX4O14627 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDX4O14627 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.52■□□□□ 0.4
CDX4O14627 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDX4O14627 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.52■□□□□ 0.4
CDX4O14627 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CDX4O14627 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.52■□□□□ 0.4
CDX4O14627 AL022326.1-202ENST00000641533 845 ntBASIC17.52■□□□□ 0.4
CDX4O14627 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CDX4O14627 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDX4O14627 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDX4O14627 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDX4O14627 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDX4O14627 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDX4O14627 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CDX4O14627 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CDX4O14627 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDX4O14627 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.51■□□□□ 0.39
CDX4O14627 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.51■□□□□ 0.39
CDX4O14627 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.51■□□□□ 0.39
CDX4O14627 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.51■□□□□ 0.39
CDX4O14627 KRT18P65-201ENST00000439811 1286 ntBASIC17.51■□□□□ 0.39
CDX4O14627 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
CDX4O14627 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.51■□□□□ 0.39
CDX4O14627 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.51■□□□□ 0.39
CDX4O14627 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.51■□□□□ 0.39
CDX4O14627 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.51■□□□□ 0.39
CDX4O14627 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDX4O14627 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDX4O14627 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.5■□□□□ 0.39
CDX4O14627 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDX4O14627 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
CDX4O14627 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDX4O14627 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDX4O14627 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDX4O14627 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.5■□□□□ 0.39
CDX4O14627 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.5■□□□□ 0.39
CDX4O14627 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.5■□□□□ 0.39
CDX4O14627 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.5■□□□□ 0.39
CDX4O14627 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.5■□□□□ 0.39
CDX4O14627 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDX4O14627 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.5■□□□□ 0.39
CDX4O14627 AC006557.2-201ENST00000592985 1240 ntBASIC17.5■□□□□ 0.39
CDX4O14627 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 AC092865.6-201ENST00000642101 219 ntBASIC17.5■□□□□ 0.39
CDX4O14627 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.5■□□□□ 0.39
CDX4O14627 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 AC002310.6-201ENST00000624451 1377 ntBASIC17.5■□□□□ 0.39
CDX4O14627 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDX4O14627 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX4O14627 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CDX4O14627 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDX4O14627 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX4O14627 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.49■□□□□ 0.39
CDX4O14627 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX4O14627 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.49■□□□□ 0.39
CDX4O14627 CNN2P11-201ENST00000429351 262 ntBASIC17.49■□□□□ 0.39
CDX4O14627 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms