Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AC024563.2-201ENST00000603282 481 ntBASIC17.35■□□□□ 0.37
LRIT2A6NDA9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.35■□□□□ 0.37
LRIT2A6NDA9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRIT2A6NDA9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.34■□□□□ 0.37
LRIT2A6NDA9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 AC093010.1-201ENST00000473625 1624 ntBASIC17.34■□□□□ 0.37
LRIT2A6NDA9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 LINC01311-201ENST00000565162 1445 ntBASIC17.34■□□□□ 0.37
LRIT2A6NDA9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 KRT89P-201ENST00000620027 1478 ntBASIC17.34■□□□□ 0.37
LRIT2A6NDA9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRIT2A6NDA9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRIT2A6NDA9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.33■□□□□ 0.36
LRIT2A6NDA9 AC007613.1-201ENST00000572811 2597 ntBASIC17.33■□□□□ 0.36
LRIT2A6NDA9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms