Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 TSPY20P-201ENST00000450910 630 ntBASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 MIR6786-201ENST00000616843 113 ntBASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 ITM2C-210ENST00000620962 501 ntBASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 AL499627.1-201ENST00000569373 2188 ntBASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF103-CHMP3A0A140T963 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 B3GAT3P1-201ENST00000471720 806 ntBASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC011506.1-201ENST00000474329 610 ntBASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF103-CHMP3A0A140T963 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 FAM197Y1-201ENST00000421178 764 ntBASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 SIRPAP1-201ENST00000448467 1770 ntBASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RNF103-CHMP3A0A140T963 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms